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MN399336.1__QFP93543.1__X__00049

Bact-Vir

MN399336.1__QFP93543.1__X__00049

Identity

Accession:
MN399336 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Edwardsiella_phage_vB_EtaM_ET-ABTNL-9

TaxID: 2651067

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 106-214
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.71 65.0 5.91e-01 97.2% 88.0%
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.70 51.0 5.75e-01 82.6% 98.8%
1jeqA05 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.57 20.0 2.92e-01 75.2% 66.7%
5ceeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 40.0 3.17e-01 72.5% 96.1%
4fo9A02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 30.0 3.03e-01 83.5% 50.4%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 36.0 4.04e-01 70.6% 92.8%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.51 38.0 3.40e-01 80.7% 75.6%
2fd4A00 3.30.40.110 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain 0.50 35.0 3.59e-01 73.4% 75.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3249964 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.72 47.0 5.49e-01 82.6% 91.3%
119462 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.72 65.0 5.92e-01 97.2% 88.0%
3397473 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 56.0 5.44e-01 90.8% 75.8%
4979945 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.70 64.0 6.07e-01 97.2% 88.8%
3879791 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.69 56.0 4.38e-01 94.5% 41.8%
3561303 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.69 56.0 4.83e-01 92.7% 57.0%
3489023 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.66 54.0 5.29e-01 94.5% 80.8%
3906009 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 36.0 3.74e-01 89.0% 60.0%
3407434 206.1.1.55 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.59 52.0 3.53e-01 98.2% 77.6%
3766928 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.59 36.0 3.49e-01 91.7% 53.2%
4969429 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.55 49.0 4.28e-01 95.4% 86.9%
3244537 6060.1.1.1 ↗ alpha arrays › Yst0336-like › Yst0336-like › Yst0336-like › PBDC1 0.52 43.0 3.89e-01 87.2% 81.4%
3668278 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.52 34.0 3.25e-01 91.7% 55.4%
D2 medium residues 1-99
PDB