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MN419153.1__QFR59175.1__ICP12017FMathbaria_115__00115

Bact-Vir

MN419153.1__QFR59175.1__ICP12017FMathbaria_115__00115

Identity

Accession:
MN419153 ↗
Kingdom:
phage

Quality

70.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mohonavirus› Vibrio_phage_ICP1_2017_F_Mathbaria

TaxID: 2653638

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-143
PDB
Domain cluster: rep: MW960032.1__QWY83295.1__X__00089__D170-241
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.59 34.0 3.19e-01 77.5% 43.8%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.58 34.0 3.34e-01 77.5% 50.0%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 36.0 3.70e-01 99.0% 74.3%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3467141 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.73 60.0 5.84e-01 87.3% 90.9%
3440839 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.69 55.0 5.61e-01 85.3% 99.0%
3825518 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.64 34.0 3.80e-01 72.5% 66.7%
3595378 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 34.0 3.04e-01 77.5% 36.7%
4319496 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 31.0 3.62e-01 72.5% 70.0%
3299579 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 35.0 4.08e-01 85.3% 84.3%
5074976 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 34.0 3.07e-01 77.5% 39.3%
3728783 223.2.1.15 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.55 33.0 3.02e-01 77.5% 42.1%
3678841 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 32.0 3.40e-01 78.4% 67.1%