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MN433707.1__QGF20151.1__vBAbaPPMK34_22__00022

Bact-Vir

MN433707.1__QGF20151.1__vBAbaPPMK34_22__00022

Identity

Accession:
MN433707 ↗
Kingdom:
phage

Quality

70.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-54
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 76.0 7.09e-01 100.0% 93.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 75.0 6.27e-01 100.0% 69.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 74.0 6.22e-01 100.0% 71.8%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 74.0 7.23e-01 100.0% 94.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 73.0 6.79e-01 100.0% 93.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 72.0 5.36e-01 100.0% 47.1%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 73.0 6.57e-01 100.0% 76.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 71.0 6.45e-01 100.0% 85.9%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 6.96e-01 100.0% 90.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 73.0 7.02e-01 100.0% 94.3%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 67.0 6.21e-01 95.7% 98.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.81e-01 95.7% 100.0%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 69.0 5.68e-01 100.0% 62.8%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 71.0 6.28e-01 100.0% 84.8%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 67.0 6.30e-01 100.0% 93.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 71.0 6.66e-01 100.0% 86.0%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.92e-01 100.0% 73.9%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 5.74e-01 100.0% 63.4%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.17e-01 100.0% 89.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 64.0 5.62e-01 100.0% 63.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.36e-01 100.0% 88.2%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 63.0 5.69e-01 100.0% 88.2%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 61.0 5.52e-01 100.0% 87.1%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.73 66.0 5.30e-01 100.0% 52.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 60.0 6.05e-01 100.0% 91.7%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.57e-01 100.0% 69.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.55e-01 100.0% 70.3%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 62.0 5.98e-01 100.0% 98.1%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 60.0 5.95e-01 100.0% 98.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.38e-01 100.0% 69.7%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.70 58.0 5.43e-01 100.0% 76.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.69e-01 100.0% 82.1%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 58.0 5.67e-01 100.0% 86.5%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.31e-01 100.0% 69.1%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 55.0 4.81e-01 100.0% 83.7%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.67 57.0 4.57e-01 100.0% 49.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 4.22e-01 100.0% 42.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 58.0 5.60e-01 100.0% 87.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 54.0 3.62e-01 100.0% 28.6%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.17e-01 100.0% 88.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.29e-01 100.0% 79.2%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 52.0 4.92e-01 100.0% 81.7%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 50.0 3.75e-01 100.0% 34.8%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.42e-01 100.0% 60.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.72e-01 100.0% 84.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.61 49.0 3.41e-01 100.0% 73.9%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.30e-01 100.0% 66.7%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 48.0 3.39e-01 93.6% 67.9%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.54e-01 100.0% 74.2%
2aj2A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.58 47.0 3.92e-01 100.0% 55.7%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 3.85e-01 100.0% 51.8%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.57 47.0 4.31e-01 100.0% 72.7%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 2.54e-01 100.0% 17.1%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030850 4.1.1.165 beta barrels › SH3 › SH3 › SH3 › DUF6501 0.90 82.0 6.61e-01 100.0% 63.5%
4367301 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 78.0 7.41e-01 100.0% 87.3%
3495480 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 77.0 7.06e-01 100.0% 90.0%
4030603 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 76.0 6.69e-01 100.0% 79.4%
3476178 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 76.0 5.55e-01 100.0% 41.7%
3348456 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.83 76.0 6.93e-01 100.0% 86.7%
3486495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 74.0 4.90e-01 97.9% 28.0%
3399912 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 74.0 6.43e-01 100.0% 77.1%
3541996 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 74.0 4.81e-01 100.0% 28.4%
4550532 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.82 73.0 5.87e-01 100.0% 68.9%
3236054 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 73.0 6.24e-01 100.0% 72.0%
4491893 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.82 76.0 5.71e-01 100.0% 61.2%
2890675 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 73.0 6.57e-01 100.0% 84.4%
3222210 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 73.0 6.35e-01 100.0% 77.1%
3514867 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 73.0 6.20e-01 100.0% 72.0%
3482683 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 72.0 6.68e-01 100.0% 90.0%
3259044 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 71.0 6.80e-01 100.0% 96.4%
3165077 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.81 70.0 6.12e-01 95.7% 85.7%
3396896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 71.0 6.06e-01 97.9% 78.7%
3518287 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.81 73.0 5.41e-01 100.0% 49.6%
3523918 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.81 71.0 6.40e-01 100.0% 78.5%
3598285 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 73.0 6.36e-01 100.0% 75.7%
4196229 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.80 70.0 6.17e-01 100.0% 87.1%
3703933 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.80 73.0 6.49e-01 100.0% 81.5%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.28e-01 100.0% 68.1%
4358722 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.80 70.0 5.39e-01 100.0% 58.1%
3587555 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.09e-01 100.0% 85.7%
3931369 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 65.0 6.41e-01 91.5% 100.0%
3956735 6055.1.1.1 extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › YajC 0.79 63.0 6.47e-01 100.0% 91.1%
3592525 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.20e-01 97.9% 62.7%
4101587 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.79 68.0 5.29e-01 100.0% 63.8%
1746358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 5.22e-01 100.0% 68.5%
4116921 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.78 62.0 5.73e-01 100.0% 68.3%
3385856 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.78 68.0 6.21e-01 100.0% 95.2%
4662947 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.78 60.0 5.43e-01 100.0% 61.5%
4347999 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.77 61.0 5.47e-01 100.0% 63.1%
5042477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.84e-01 97.9% 84.4%
3598284 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 61.0 5.77e-01 100.0% 74.5%
4321173 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.76 62.0 5.83e-01 100.0% 74.1%
4191690 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.75 62.0 5.81e-01 100.0% 74.1%
3700745 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.12e-01 100.0% 88.0%
3938589 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 64.0 6.32e-01 100.0% 88.0%
3928136 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 6.15e-01 100.0% 86.7%
4446467 4.1.1.278 beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.75 62.0 5.74e-01 100.0% 87.7%
3854638 4.1.1.131 beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.74 67.0 5.16e-01 100.0% 47.0%
3517651 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.53e-01 100.0% 72.0%
3781711 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.74 59.0 5.61e-01 100.0% 74.5%
1263586 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.46e-01 100.0% 84.7%
3930643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.98e-01 100.0% 83.3%
1263580 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.73 60.0 5.35e-01 100.0% 81.3%
4084190 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.73 60.0 5.56e-01 100.0% 72.9%
3964733 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.61e-01 100.0% 78.2%
3404936 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.73 61.0 6.04e-01 100.0% 88.0%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.73 61.0 5.98e-01 100.0% 88.0%
4319097 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 64.0 5.95e-01 100.0% 79.3%
4844109 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.73 61.0 5.36e-01 100.0% 62.0%
3934192 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.99e-01 100.0% 86.7%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.65e-01 100.0% 72.9%
3514556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.59e-01 100.0% 72.9%
3922426 4.1.1.363 beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.72 64.0 4.72e-01 100.0% 43.3%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 64.0 5.59e-01 100.0% 74.3%
3270324 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 64.0 6.31e-01 100.0% 94.0%
3264883 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.72 61.0 5.85e-01 100.0% 87.3%
3937333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.30e-01 100.0% 62.5%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 62.0 5.95e-01 100.0% 89.1%
5061293 219.1.1.77 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.71 60.0 3.95e-01 100.0% 29.8%
5039349 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.45e-01 97.9% 98.3%
3927795 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.79e-01 100.0% 88.3%
4418620 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 58.0 3.11e-01 100.0% 4.3%
3903213 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 57.0 3.90e-01 100.0% 25.1%
3511277 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 57.0 4.95e-01 100.0% 71.2%
5037772 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 59.0 4.51e-01 100.0% 43.4%
3625177 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 59.0 4.29e-01 100.0% 36.3%
4679625 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.47e-01 100.0% 80.0%
4937587 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 56.0 3.96e-01 100.0% 36.4%
3193814 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.67 57.0 4.33e-01 100.0% 40.8%
3616007 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.67 57.0 5.50e-01 97.9% 87.3%
4459365 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 54.0 4.76e-01 100.0% 77.5%
3929373 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.67 57.0 5.37e-01 100.0% 88.3%
3275615 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 55.0 4.12e-01 97.9% 41.1%
3553983 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.65 56.0 5.21e-01 100.0% 85.0%
4068333 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 53.0 4.93e-01 100.0% 78.5%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.65 55.0 5.17e-01 100.0% 85.0%
4137160 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.64 54.0 4.61e-01 100.0% 60.0%
2700914 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 54.0 4.65e-01 100.0% 60.0%
4210485 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.64 53.0 4.87e-01 100.0% 75.4%
4933205 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 52.0 4.37e-01 100.0% 75.6%
5022234 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.63 51.0 4.49e-01 100.0% 62.8%
3662319 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 52.0 4.51e-01 100.0% 72.5%
4432348 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.71e-01 100.0% 70.6%
4658938 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.61 51.0 4.25e-01 100.0% 54.4%
4123180 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.61 51.0 4.48e-01 100.0% 65.3%
4945675 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.60 50.0 3.65e-01 100.0% 38.0%
3696482 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.02e-01 100.0% 57.3%
D2 medium residues 113-172
PDB