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MN445185.1__QKN85958.1__ACEC001_1200__00122

Bact-Vir

MN445185.1__QKN85958.1__ACEC001_1200__00122

Identity

Accession:
MN445185 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Seoulvirus› Escherichia_phage_vB_EcoM_EC001

TaxID: 2739754

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-72
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 78.0 5.51e-01 100.0% 34.7%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 66.0 5.02e-01 100.0% 39.3%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 69.0 4.80e-01 100.0% 31.5%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 49.0 3.50e-01 83.6% 70.1%
2i53A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 49.0 4.19e-01 100.0% 67.6%
3c4wB01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.54 46.0 3.32e-01 97.0% 43.1%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.51 37.0 3.19e-01 77.6% 69.4%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.51 40.0 4.06e-01 95.5% 88.1%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4093256 2004.1.1.545 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.91 86.0 5.52e-01 100.0% 26.0%
3665498 2004.1.1.153 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.91 86.0 5.41e-01 100.0% 28.8%
None — 0.90 86.0 5.35e-01 100.0% 22.3%
None — 0.90 85.0 5.47e-01 100.0% 27.7%
4275455 2004.1.1.258 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.89 83.0 5.15e-01 100.0% 20.0%
None — 0.89 84.0 5.24e-01 100.0% 23.9%
3595524 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 81.0 5.10e-01 100.0% 21.3%
4134121 2004.1.1.623 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, MCM, AAA_2, AAA_5 0.88 81.0 5.04e-01 100.0% 20.0%
4091103 2004.1.1.258 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.88 81.0 5.07e-01 100.0% 20.9%
4377664 2004.1.1.545 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.87 81.0 5.07e-01 100.0% 21.3%
4643309 2004.1.1.702 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, MCM, AAA_2 0.87 81.0 5.00e-01 100.0% 20.0%
3248250 2004.1.1.154 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.86 80.0 4.89e-01 100.0% 18.4%
2034199 2004.1.1.154 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.86 80.0 6.45e-01 100.0% 56.3%
2034195 2004.1.1.153 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.86 80.0 6.50e-01 100.0% 57.8%
1931021 2004.1.1.153 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.86 79.0 6.44e-01 100.0% 56.3%
2724427 2004.1.1.441 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2 0.86 79.0 6.49e-01 100.0% 58.3%
2642909 2004.1.1.258 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.86 79.0 5.81e-01 100.0% 41.1%
2642908 2004.1.1.154 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.85 78.0 6.10e-01 100.0% 49.3%
3360645 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 48.0 4.06e-01 73.1% 81.8%
4977777 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 48.0 3.99e-01 77.6% 64.2%
3206206 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 48.0 4.65e-01 91.0% 73.3%
3194523 148.1.3.212 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 0.62 46.0 3.89e-01 79.1% 85.2%
3960012 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.60 45.0 3.71e-01 80.6% 85.8%
3467750 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 45.0 4.23e-01 97.0% 95.3%
4322468 101.1.2.170 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_51 0.50 35.0 3.17e-01 92.5% 50.5%