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MN445185.1__QKN86019.1__ACEC001_1780__00183
Bact-VirMN445185.1__QKN86019.1__ACEC001_1780__00183
Identity
- Accession:
- MN445185 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Seoulvirus›
Escherichia_phage_vB_EcoM_EC001
TaxID: 2739754
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-49
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hzeA00 | 3.30.70.1860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein family Ycf54 | 0.70 | 59.0 | 4.63e-01 | 97.9% | 89.7% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 53.0 | 4.33e-01 | 100.0% | 49.5% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 46.0 | 3.32e-01 | 100.0% | 26.8% |
| 2yq1C00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.60 | 48.0 | 3.72e-01 | 100.0% | 67.9% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 45.0 | 3.96e-01 | 100.0% | 54.5% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 49.0 | 4.48e-01 | 100.0% | 88.4% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.59 | 45.0 | 2.98e-01 | 83.3% | 37.4% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 46.0 | 3.85e-01 | 100.0% | 46.3% |
| 8dwoK02 | 2.60.40.4310 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain B | 0.55 | 41.0 | 3.80e-01 | 97.9% | 62.5% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.54 | 44.0 | 4.15e-01 | 97.9% | 85.7% |
| 3kq4B03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.53 | 41.0 | 3.30e-01 | 97.9% | 39.3% |
| 3mpcA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.59e-01 | 100.0% | 53.1% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.53 | 41.0 | 3.42e-01 | 97.9% | 81.9% |
| 1wkbA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.53 | 44.0 | 2.89e-01 | 97.9% | 99.1% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.53 | 42.0 | 3.94e-01 | 95.8% | 98.5% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.52 | 40.0 | 4.05e-01 | 91.7% | 89.8% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.40e-01 | 79.2% | 72.6% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.51 | 39.0 | 3.14e-01 | 100.0% | 38.5% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 38.0 | 3.69e-01 | 100.0% | 74.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3862518 | 4076.1.1.2 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI | 0.64 | 54.0 | 5.18e-01 | 93.8% | 81.8% |
| 3218303 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.62 | 45.0 | 4.64e-01 | 95.8% | 86.7% |
| 3338287 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.61 | 47.0 | 4.41e-01 | 100.0% | 67.7% |
| 3911249 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.60 | 45.0 | 3.83e-01 | 100.0% | 46.3% |
| 4338821 | 221.1.1.69 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SNX17-27-31_F1_FERM | 0.60 | 49.0 | 3.98e-01 | 100.0% | 45.7% |
| 3935925 | 10.12.1.101 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 | 0.60 | 42.0 | 2.52e-01 | 91.7% | 9.0% |
| 3405565 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.58 | 49.0 | 3.99e-01 | 100.0% | 50.5% |
| 5027726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 3.92e-01 | 100.0% | 54.7% |
| 3594652 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.56 | 46.0 | 2.96e-01 | 100.0% | 56.0% |
| 4427429 | 11.1.1.1247 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4912 | 0.56 | 47.0 | 3.59e-01 | 100.0% | 41.6% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 44.0 | 3.83e-01 | 100.0% | 94.4% |
| 5025566 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 42.0 | 4.12e-01 | 91.7% | 100.0% |
| 3927982 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 3.73e-01 | 100.0% | 58.9% |
| 5028844 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.53 | 41.0 | 3.74e-01 | 95.8% | 100.0% |
| 4661047 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.53 | 43.0 | 2.78e-01 | 100.0% | 17.5% |
| 3494105 | 221.1.1.64 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N | 0.51 | 40.0 | 3.59e-01 | 100.0% | 58.7% |
| 3988077 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.82e-01 | 97.9% | 100.0% |
| 5032980 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.38e-01 | 100.0% | 52.6% |
| 3933498 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.50 | 41.0 | 3.23e-01 | 97.9% | 40.9% |
| 4170754 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.50 | 38.0 | 3.72e-01 | 95.8% | 95.0% |