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MN481367.1__QGF20859.1__X__00127

Bact-Vir

MN481367.1__QGF20859.1__X__00127

Identity

Accession:
MN481367 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-82
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.68 60.0 4.74e-01 100.0% 81.1%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.66 44.0 4.99e-01 92.6% 95.8%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 49.0 3.83e-01 82.4% 86.5%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.98e-01 79.4% 93.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.10e-01 85.3% 92.8%
3ebkB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 48.0 3.63e-01 79.4% 51.2%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 43.0 3.92e-01 97.1% 51.6%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 46.0 2.95e-01 76.5% 23.4%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.64 57.0 4.46e-01 98.5% 88.0%
2v95A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.64 49.0 3.97e-01 82.4% 100.0%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.64 54.0 4.10e-01 100.0% 90.5%
8ew8A01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.63 48.0 3.29e-01 80.9% 73.7%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.62 53.0 4.15e-01 100.0% 95.1%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 3.65e-01 95.6% 94.0%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 3.76e-01 97.1% 98.3%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.62 55.0 4.65e-01 98.5% 78.2%
3f1sA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.61 47.0 3.69e-01 83.8% 98.7%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.61 46.0 4.46e-01 100.0% 70.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.65e-01 82.4% 95.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 46.0 3.12e-01 80.9% 43.8%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.60 41.0 3.55e-01 70.6% 68.5%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.60 46.0 2.99e-01 83.8% 20.3%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 46.0 3.08e-01 85.3% 42.2%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 40.0 4.13e-01 100.0% 76.2%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 44.0 3.65e-01 80.9% 89.5%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.58 51.0 4.03e-01 100.0% 52.4%
2m4lA00 2.40.128.360 Mainly Beta › Beta Barrel › Lipocalin › 0.58 40.0 3.63e-01 73.5% 69.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 47.0 3.20e-01 89.7% 93.3%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 3.85e-01 94.1% 70.7%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 44.0 2.80e-01 83.8% 17.9%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 3.00e-01 92.6% 96.2%
1pn2D02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 48.0 3.97e-01 95.6% 87.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.56 49.0 4.45e-01 100.0% 84.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.89e-01 97.1% 69.8%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.55e-01 91.2% 56.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.70e-01 94.1% 85.0%
2b39A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 3.85e-01 95.6% 80.8%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 45.0 3.67e-01 92.6% 85.0%
1s2kA00 2.60.120.700 Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 0.54 48.0 3.45e-01 100.0% 59.3%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.80e-01 70.6% 88.7%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.54 43.0 3.08e-01 89.7% 59.2%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 45.0 3.82e-01 98.5% 77.7%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 47.0 3.85e-01 100.0% 87.0%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 46.0 3.72e-01 97.1% 76.4%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.75e-01 92.6% 97.1%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.34e-01 100.0% 75.9%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 2.72e-01 92.6% 37.1%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.51 46.0 2.96e-01 100.0% 90.8%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.25e-01 83.8% 98.4%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 37.0 3.65e-01 100.0% 73.6%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 45.0 3.40e-01 100.0% 89.9%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 45.0 3.08e-01 100.0% 41.4%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 46.0 2.94e-01 100.0% 31.8%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.63e-01 98.5% 74.6%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 3.63e-01 95.6% 79.8%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.78e-01 89.7% 76.1%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060010 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 46.0 5.49e-01 97.1% 100.0%
4342741 243.19.1.3 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N 0.70 54.0 5.00e-01 82.4% 81.2%
4170432 4998.1.1.1 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.68 57.0 4.60e-01 89.7% 84.8%
3962855 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.68 49.0 4.15e-01 76.5% 55.8%
4931123 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.68 46.0 4.51e-01 100.0% 64.0%
4680916 4998.1.1.1 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.68 55.0 4.47e-01 89.7% 85.4%
3787213 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 47.0 3.97e-01 98.5% 43.5%
5053933 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 46.0 4.70e-01 98.5% 73.8%
3545608 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.67 49.0 3.01e-01 76.5% 25.6%
3795209 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.66 57.0 3.34e-01 92.6% 85.5%
5030522 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 55.0 3.74e-01 94.1% 92.5%
4225063 3840.1.1.2 a+b two layers › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › PerB 0.64 47.0 4.06e-01 79.4% 63.6%
1874587 6176.1.1.1 beta sandwiches › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Peptidase_A21 0.64 57.0 4.43e-01 98.5% 86.2%
5004981 3335.1.1.0 beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B 0.63 53.0 5.41e-01 92.6% 98.5%
3900936 247.1.1.5 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C 0.63 52.0 3.51e-01 94.1% 55.9%
3790336 5.1.3.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 0.63 45.0 3.14e-01 76.5% 34.9%
4012990 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.63 56.0 4.16e-01 100.0% 82.7%
4647654 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.63 54.0 4.50e-01 97.1% 87.5%
3737835 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.62 56.0 4.89e-01 100.0% 79.0%
5018282 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 46.0 2.95e-01 79.4% 80.9%
4342106 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 45.0 2.87e-01 77.9% 25.2%
3686499 298.1.1.25 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C 0.61 54.0 3.62e-01 98.5% 78.9%
3436743 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 46.0 2.99e-01 82.4% 84.4%
5005811 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.61 38.0 3.67e-01 97.1% 53.8%
4981443 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.61 45.0 2.80e-01 79.4% 19.7%
4157830 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.60 53.0 3.53e-01 98.5% 93.9%
3223991 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 44.0 2.85e-01 77.9% 83.0%
4927832 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 51.0 4.47e-01 100.0% 79.1%
4946309 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.60 52.0 3.56e-01 98.5% 90.0%
4216416 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.60 50.0 3.06e-01 92.6% 70.4%
4207211 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.59 52.0 4.05e-01 100.0% 72.9%
4009943 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.59 49.0 4.03e-01 92.6% 88.0%
3657857 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.59 50.0 3.38e-01 95.6% 85.2%
3741896 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 49.0 3.07e-01 92.6% 92.9%
1813127 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.58 49.0 2.89e-01 92.6% 95.4%
3789270 5.1.4.115 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CRT10 0.58 50.0 2.96e-01 95.6% 23.6%
3596265 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 42.0 3.78e-01 79.4% 79.0%
3468705 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 46.0 2.85e-01 88.2% 41.5%
4998404 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 46.0 4.93e-01 91.2% 100.0%
5011114 2003.6.1.5 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.56 49.0 3.35e-01 100.0% 90.0%
3939547 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 49.0 3.18e-01 98.5% 29.1%
3770717 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.56 50.0 3.16e-01 98.5% 38.5%
3811166 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 42.0 2.81e-01 80.9% 83.2%
3668331 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 43.0 2.81e-01 83.8% 30.3%
3853086 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 50.0 3.15e-01 100.0% 97.4%
3894385 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 49.0 3.16e-01 98.5% 25.7%
4539150 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.55 47.0 3.77e-01 95.6% 98.5%
3936023 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.12e-01 97.1% 29.7%
3928054 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 48.0 3.25e-01 98.5% 31.7%
4366777 5.1.5.205 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF27482 0.55 47.0 2.98e-01 97.1% 89.0%
3778085 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 50.0 3.01e-01 100.0% 87.9%
3627380 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 3.09e-01 98.5% 26.8%
3816322 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 47.0 3.07e-01 98.5% 87.2%
3343522 3304.1.1.2 a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.54 45.0 3.63e-01 97.1% 65.5%
3823661 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.54 46.0 3.02e-01 95.6% 91.5%
3230195 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 47.0 3.00e-01 98.5% 26.7%
3216630 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 42.0 2.62e-01 85.3% 18.3%
4029617 5.1.11.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.53 46.0 2.80e-01 100.0% 19.3%
3684135 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.52 46.0 2.98e-01 98.5% 86.1%
3851509 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.52 45.0 2.73e-01 98.5% 31.8%
3608340 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 3.28e-01 86.8% 50.0%
3634325 5.1.4.244 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.51 42.0 2.70e-01 89.7% 32.4%
3718535 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 41.0 2.62e-01 88.2% 21.3%