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MN505213.1__QGF20873.1__X__00012
Bact-VirMN505213.1__QGF20873.1__X__00012
Identity
- Accession:
- MN505213 ↗
- Kingdom:
- phage
Quality
55.6
mean pLDDT
Taxonomy
TaxID: 2315217
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 134-326
D2
medium
residues 1-131
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 34.0 | 3.20e-01 | 70.2% | 36.4% |
| 7m2wE01 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.73 | 42.0 | 3.16e-01 | 92.4% | 24.2% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.61 | 55.0 | 4.44e-01 | 100.0% | 78.1% |
| 3bqoA00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.58 | 43.0 | 3.78e-01 | 77.9% | 67.3% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 42.0 | 3.38e-01 | 100.0% | 40.0% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 42.0 | 3.26e-01 | 100.0% | 37.5% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 48.0 | 3.75e-01 | 98.5% | 45.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3801950 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.80 | 55.0 | 4.68e-01 | 70.2% | 55.1% |
| 4315070 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.74 | 44.0 | 3.97e-01 | 90.1% | 44.0% |
| 3292425 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.73 | 45.0 | 3.83e-01 | 86.3% | 39.5% |
| 3626316 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.71 | 38.0 | 3.89e-01 | 72.5% | 53.8% |
| 3823532 | 192.29.1.19 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon | 0.70 | 50.0 | 4.83e-01 | 73.3% | 85.5% |
| 4643581 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.66 | 47.0 | 4.07e-01 | 74.0% | 72.5% |
| 3800855 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 46.0 | 4.45e-01 | 71.8% | 70.3% |
| 3715476 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.63 | 38.0 | 3.63e-01 | 81.7% | 52.7% |
| 3692530 | 5054.1.1.58 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › YVC1_C | 0.63 | 46.0 | 3.33e-01 | 75.6% | 85.2% |
| 3500243 | 1008.1.1.74 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CC_Cfap43 | 0.62 | 43.0 | 4.26e-01 | 98.5% | 67.1% |
| 4933088 | 5069.1.1.20 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B_N_2 | 0.61 | 46.0 | 3.66e-01 | 77.1% | 40.4% |
| 3409567 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.60 | 41.0 | 3.85e-01 | 100.0% | 55.8% |
| 5019699 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 41.0 | 3.58e-01 | 72.5% | 46.2% |
| 3995010 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 40.0 | 3.89e-01 | 70.2% | 63.6% |
| 3958018 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 41.0 | 3.55e-01 | 70.2% | 62.6% |
| 3631853 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 31.0 | 2.88e-01 | 73.3% | 37.9% |
| 5070059 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.57 | 46.0 | 3.73e-01 | 99.2% | 45.2% |
| 4933354 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.56 | 39.0 | 3.15e-01 | 70.2% | 67.5% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.55 | 36.0 | 3.39e-01 | 100.0% | 51.8% |
| 3726923 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.53 | 39.0 | 3.98e-01 | 75.6% | 85.4% |
| 3997412 | 3755.4.1.41 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › CDK5RAP3 | 0.51 | 47.0 | 3.76e-01 | 100.0% | 53.4% |
| 4024355 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.50 | 45.0 | 3.54e-01 | 98.5% | 53.0% |
| 5002671 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.50 | 39.0 | 3.64e-01 | 99.2% | 66.9% |
D3
medium
residues 349-389