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MN505213.1__QGF20915.1__X__00002

Bact-Vir

MN505213.1__QGF20915.1__X__00002

Identity

Accession:
MN505213 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Dunedinvirus› Serratia_phage_JS26

TaxID: 2315217

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-99
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h4iA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.65 48.0 2.89e-01 78.8% 31.8%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 46.0 4.52e-01 76.5% 77.4%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 56.0 3.52e-01 100.0% 38.9%
3vmaA03 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.62 36.0 3.60e-01 77.6% 55.6%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 34.0 3.82e-01 74.1% 73.0%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 41.0 3.71e-01 72.9% 79.2%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 49.0 3.38e-01 92.9% 33.1%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.79e-01 83.5% 54.7%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 31.0 3.38e-01 72.9% 63.4%
1vw4502 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.99e-01 76.5% 76.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 31.0 3.35e-01 74.1% 63.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 31.0 3.32e-01 74.1% 61.6%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 45.0 3.73e-01 91.8% 57.0%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 41.0 3.77e-01 81.2% 70.9%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 41.0 3.51e-01 78.8% 76.6%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.56e-01 75.3% 74.4%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 33.0 3.34e-01 74.1% 61.4%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 44.0 2.94e-01 91.8% 24.7%
1stzA03 3.30.390.60 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Heat-inducible transcription repressor hrca homolog; domain 3 0.53 37.0 3.68e-01 71.8% 98.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 3.47e-01 80.0% 52.3%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 38.0 3.35e-01 80.0% 75.2%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 43.0 3.79e-01 91.8% 80.0%
1f9cA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 38.0 3.44e-01 78.8% 91.8%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.71e-01 70.6% 89.3%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.52 43.0 3.43e-01 94.1% 73.1%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.51 42.0 3.31e-01 92.9% 68.8%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 42.0 3.77e-01 96.5% 82.9%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.36e-01 81.2% 68.5%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3169437 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 53.0 3.43e-01 83.5% 33.9%
3816041 2004.1.1.299 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1995 0.65 51.0 3.58e-01 85.9% 85.5%
3690906 5.1.4.250 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF2415 0.64 56.0 3.56e-01 96.5% 30.7%
3432796 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.64 47.0 4.82e-01 76.5% 96.2%
3609794 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 49.0 3.19e-01 82.4% 24.9%
3729350 5.1.4.411 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF2415 0.63 55.0 3.50e-01 96.5% 30.6%
3665228 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 27.0 3.87e-01 88.2% 87.5%
3211396 5.1.4.167 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.62 49.0 3.24e-01 85.9% 25.1%
3194250 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 51.0 3.33e-01 90.6% 31.4%
3203494 5.1.4.250 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF2415 0.61 55.0 3.49e-01 100.0% 39.5%
4130525 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 45.0 2.84e-01 81.2% 24.7%
3174440 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 41.0 3.39e-01 74.1% 46.1%
3723546 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 51.0 3.39e-01 95.3% 28.1%
3972573 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.59 43.0 3.95e-01 78.8% 60.9%
3229601 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 32.0 3.67e-01 70.6% 75.0%
4146428 5.1.3.154 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 0.57 48.0 3.12e-01 95.3% 26.0%
4572902 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 49.0 3.20e-01 97.6% 33.2%
3806458 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 44.0 3.82e-01 88.2% 80.0%
4124320 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 44.0 3.93e-01 88.2% 78.5%
3830187 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 31.0 3.70e-01 72.9% 83.6%
3330943 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.56 31.0 3.69e-01 72.9% 83.6%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 31.0 3.21e-01 72.9% 57.5%
4609775 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.55 38.0 3.71e-01 71.8% 98.9%
4278807 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.55 38.0 3.55e-01 72.9% 98.2%
3699753 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.55 42.0 3.98e-01 89.4% 69.0%
3832734 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 44.0 2.83e-01 89.4% 20.0%
2773872 5.1.5.79 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th 0.54 43.0 2.91e-01 88.2% 23.6%
3653604 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 40.0 3.35e-01 80.0% 72.3%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.54 30.0 3.26e-01 70.6% 65.7%
3188259 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 38.0 3.73e-01 75.3% 100.0%
3725709 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.78e-01 82.4% 79.1%
3477257 5.1.4.148 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR93 0.53 46.0 2.87e-01 100.0% 27.9%
3788355 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 46.0 2.95e-01 96.5% 19.8%
3599635 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.81e-01 96.5% 23.1%
3414063 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.52 30.0 3.54e-01 71.8% 89.1%
4065004 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 36.0 3.41e-01 75.3% 88.2%