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MN505213.1__QGF20925.1__X__00035
Bact-VirMN505213.1__QGF20925.1__X__00035
Identity
- Accession:
- MN505213 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 2315217
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-55
Domain cluster:
rep: CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00056__D4-55
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 4.29e-01 | 85.2% | 59.7% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 46.0 | 3.28e-01 | 83.3% | 25.7% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 43.0 | 2.57e-01 | 77.8% | 20.8% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 41.0 | 3.07e-01 | 70.4% | 38.9% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 49.0 | 4.92e-01 | 96.3% | 94.5% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 38.0 | 4.00e-01 | 75.9% | 75.0% |
| 3e66A01 | 3.30.420.230 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region | 0.58 | 51.0 | 3.65e-01 | 100.0% | 34.8% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 3.57e-01 | 100.0% | 40.4% |
| 1jv2B04 | 4.10.1240.30 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.57 | 37.0 | 3.24e-01 | 74.1% | 40.7% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 36.0 | 3.60e-01 | 79.6% | 61.4% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 2.60e-01 | 77.8% | 28.9% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 3.54e-01 | 88.9% | 82.9% |
| 3n54B01 | 6.20.190.10 | Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 | 0.56 | 39.0 | 3.78e-01 | 74.1% | 67.2% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.56 | 39.0 | 3.07e-01 | 100.0% | 30.4% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.77e-01 | 92.6% | 64.6% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 44.0 | 3.13e-01 | 90.7% | 63.8% |
| 2vhjA02 | 2.30.270.20 | Mainly Beta › Roll › duf1285 protein fold › | 0.55 | 39.0 | 3.84e-01 | 98.1% | 69.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.55 | 43.0 | 3.09e-01 | 90.7% | 92.3% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.55 | 40.0 | 2.83e-01 | 94.4% | 22.6% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 47.0 | 4.31e-01 | 100.0% | 74.0% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 41.0 | 3.57e-01 | 100.0% | 53.5% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 42.0 | 3.13e-01 | 94.4% | 84.2% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 45.0 | 3.66e-01 | 100.0% | 83.3% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.53 | 40.0 | 3.12e-01 | 87.0% | 66.4% |
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.52 | 33.0 | 3.28e-01 | 79.6% | 57.9% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.03e-01 | 90.7% | 72.7% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.52 | 36.0 | 3.82e-01 | 74.1% | 95.7% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.50e-01 | 90.7% | 63.6% |
| 1bvuA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 40.0 | 3.09e-01 | 98.1% | 34.2% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 2.99e-01 | 77.8% | 69.1% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.51 | 41.0 | 2.96e-01 | 100.0% | 45.3% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 2.53e-01 | 92.6% | 22.5% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 42.0 | 3.54e-01 | 100.0% | 98.0% |
| 5l8sA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.64e-01 | 100.0% | 19.1% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.50 | 40.0 | 3.11e-01 | 98.1% | 56.6% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974680 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.64 | 39.0 | 2.73e-01 | 100.0% | 17.8% |
| 3608575 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 52.0 | 4.12e-01 | 100.0% | 44.7% |
| 3629049 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.62 | 45.0 | 3.79e-01 | 79.6% | 55.8% |
| 3775920 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.61 | 45.0 | 3.59e-01 | 85.2% | 59.2% |
| 3945427 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.59 | 48.0 | 4.24e-01 | 94.4% | 90.6% |
| 4937420 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.59 | 42.0 | 2.47e-01 | 77.8% | 16.0% |
| 3812257 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.58 | 45.0 | 3.11e-01 | 94.4% | 25.0% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 43.0 | 3.63e-01 | 100.0% | 45.2% |
| 3520763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 32.0 | 2.91e-01 | 70.4% | 36.0% |
| 4285674 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.57 | 47.0 | 4.09e-01 | 96.3% | 90.0% |
| 4091312 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.57 | 46.0 | 4.08e-01 | 94.4% | 90.6% |
| 4330501 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.57 | 46.0 | 3.71e-01 | 96.3% | 77.5% |
| 4048745 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 46.0 | 4.02e-01 | 96.3% | 93.3% |
| 314827 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.56 | 40.0 | 2.36e-01 | 77.8% | 15.9% |
| 4058606 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 46.0 | 4.02e-01 | 96.3% | 90.0% |
| 4447486 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 46.0 | 4.09e-01 | 94.4% | 96.2% |
| 4630176 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.56 | 45.0 | 3.34e-01 | 90.7% | 71.0% |
| 4046343 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 46.0 | 3.97e-01 | 96.3% | 90.0% |
| 3727253 | 3922.1.1.250 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › ATG14 | 0.56 | 43.0 | 2.60e-01 | 85.2% | 50.7% |
| 3687261 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.55 | 46.0 | 3.08e-01 | 92.6% | 91.9% |
| 3377269 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.55 | 41.0 | 2.48e-01 | 79.6% | 98.4% |
| 4041535 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.55 | 37.0 | 3.25e-01 | 72.2% | 50.0% |
| 3997872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 3.82e-01 | 72.2% | 91.4% |
| 4982277 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 41.0 | 3.99e-01 | 90.7% | 84.6% |
| 4989812 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.54 | 42.0 | 4.16e-01 | 92.6% | 80.0% |
| 3397845 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 3.55e-01 | 92.6% | 51.4% |
| 5010443 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.54 | 38.0 | 2.27e-01 | 77.8% | 16.9% |
| 3601081 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.52 | 42.0 | 3.07e-01 | 94.4% | 85.5% |
| 3321918 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.52 | 32.0 | 3.58e-01 | 81.5% | 85.0% |
| 5060170 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 42.0 | 2.75e-01 | 100.0% | 49.2% |
| 5023504 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.52 | 42.0 | 2.52e-01 | 98.1% | 18.2% |
| 3747392 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.51 | 40.0 | 3.80e-01 | 87.0% | 90.8% |
| 3999926 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 31.0 | 3.17e-01 | 70.4% | 60.0% |
| 3255870 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.51 | 43.0 | 3.57e-01 | 100.0% | 51.4% |
| 3602786 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 35.0 | 2.13e-01 | 77.8% | 15.6% |
| 3718008 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 32.0 | 3.35e-01 | 92.6% | 68.0% |
| 4987289 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.55e-01 | 100.0% | 16.5% |
| 3594033 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 34.0 | 2.29e-01 | 98.1% | 16.4% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.50 | 34.0 | 2.26e-01 | 75.9% | 82.6% |
| 3734923 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 41.0 | 2.53e-01 | 94.4% | 15.5% |