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MN508817.1__QFR55721.1__JC221_075__00075

Bact-Vir

MN508817.1__QFR55721.1__JC221_075__00075

Identity

Accession:
MN508817 ↗
Kingdom:
phage

Quality

68.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-79
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 55.0 6.40e-01 73.0% 100.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 5.63e-01 97.3% 84.1%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.73 50.0 5.64e-01 100.0% 98.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 53.0 5.42e-01 98.6% 79.5%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.72 54.0 4.49e-01 79.7% 50.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 5.00e-01 75.7% 80.2%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 49.0 4.96e-01 73.0% 91.9%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 46.0 5.27e-01 71.6% 98.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 46.0 5.29e-01 71.6% 100.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 4.58e-01 75.7% 85.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.63e-01 98.6% 96.6%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.42e-01 74.3% 100.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.24e-01 73.0% 90.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 46.0 4.95e-01 70.3% 92.2%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 5.28e-01 94.6% 89.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.45e-01 95.9% 100.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 4.74e-01 74.3% 74.6%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 44.0 3.68e-01 70.3% 99.2%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 57.0 5.32e-01 97.3% 80.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.86e-01 73.0% 89.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 41.0 4.80e-01 71.6% 97.9%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 51.0 4.32e-01 94.6% 52.0%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 51.0 4.28e-01 94.6% 50.4%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.63 45.0 3.86e-01 75.7% 47.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 51.0 5.30e-01 97.3% 98.5%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 47.0 5.08e-01 100.0% 100.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 5.46e-01 97.3% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.81e-01 100.0% 91.3%
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 44.0 2.71e-01 79.7% 25.9%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.03e-01 87.8% 94.1%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 47.0 4.44e-01 100.0% 72.8%
2gc9B00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.69e-01 90.5% 87.0%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.58 39.0 3.88e-01 70.3% 71.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.53e-01 100.0% 78.4%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.67e-01 89.2% 63.1%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.60e-01 95.9% 87.6%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.78e-01 89.2% 58.9%
3tu3B01 3.30.720.80 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 38.0 3.82e-01 71.6% 76.3%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 47.0 4.28e-01 100.0% 68.9%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.55 44.0 3.24e-01 87.8% 43.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.53 45.0 4.19e-01 95.9% 95.7%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 40.0 3.98e-01 100.0% 79.7%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.52 41.0 2.62e-01 89.2% 56.6%
4b9dB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 42.0 3.89e-01 89.2% 86.0%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.75e-01 95.9% 88.8%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 59.0 6.74e-01 75.7% 96.4%
4997767 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 51.0 6.38e-01 91.9% 100.0%
5058671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 56.0 6.36e-01 100.0% 92.7%
5033075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 56.0 6.36e-01 100.0% 92.7%
4990212 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 56.0 6.43e-01 74.3% 94.5%
5017214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 56.0 6.43e-01 100.0% 96.4%
4952887 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 56.0 6.33e-01 100.0% 94.5%
4946165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 57.0 6.49e-01 100.0% 98.2%
4950396 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 52.0 5.88e-01 75.7% 89.1%
4992872 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 57.0 6.55e-01 100.0% 100.0%
4947995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 53.0 6.04e-01 100.0% 94.5%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 6.38e-01 74.3% 100.0%
5040416 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 51.0 5.96e-01 98.6% 100.0%
3875218 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.77 52.0 5.56e-01 97.3% 80.0%
4980648 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.88e-01 100.0% 82.9%
4027422 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 52.0 5.94e-01 74.3% 94.5%
5025079 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 53.0 6.00e-01 100.0% 98.2%
4967397 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.77 56.0 5.98e-01 98.6% 87.7%
5060760 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 56.0 5.94e-01 100.0% 87.7%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 61.0 6.44e-01 98.6% 96.9%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.76 52.0 5.38e-01 97.3% 75.7%
4975150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 55.0 5.97e-01 100.0% 96.7%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 52.0 5.71e-01 98.6% 90.0%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.88e-01 100.0% 87.1%
3404643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 56.0 5.76e-01 97.3% 85.7%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.68e-01 77.0% 100.0%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 52.0 4.95e-01 94.6% 64.7%
3941004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.81e-01 98.6% 81.2%
3407089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 54.0 5.26e-01 98.6% 72.5%
3391558 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 52.0 5.10e-01 97.3% 70.0%
3684908 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 49.0 4.90e-01 74.3% 69.3%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.71 50.0 5.62e-01 97.3% 98.2%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.80e-01 94.6% 100.0%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.71 47.0 5.11e-01 73.0% 83.3%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.71 48.0 4.85e-01 74.3% 69.3%
4660107 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.71 47.0 5.17e-01 73.0% 85.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.65e-01 75.7% 98.2%
3881119 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 51.0 4.97e-01 98.6% 70.0%
3660923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 47.0 4.89e-01 74.3% 74.3%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.70 47.0 5.18e-01 74.3% 86.7%
3261235 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 56.0 5.33e-01 95.9% 74.1%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 57.0 5.70e-01 100.0% 86.7%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.70 50.0 5.17e-01 78.4% 80.0%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.70 46.0 4.85e-01 71.6% 76.9%
4002896 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 53.0 4.97e-01 82.4% 66.7%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.70 51.0 5.61e-01 97.3% 96.7%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 47.0 5.16e-01 73.0% 86.7%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 46.0 4.92e-01 70.3% 78.5%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 53.0 5.07e-01 95.9% 70.6%
3877485 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 52.0 4.97e-01 94.6% 69.4%
3879064 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 51.0 4.81e-01 97.3% 64.4%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.38e-01 100.0% 94.8%
4101502 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.69 48.0 5.49e-01 74.3% 100.0%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.69 47.0 4.86e-01 74.3% 75.7%
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 51.0 4.91e-01 97.3% 69.4%
4147056 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 51.0 4.60e-01 82.4% 58.0%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 54.0 5.79e-01 95.9% 96.9%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.18e-01 74.3% 90.0%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 3.73e-01 100.0% 34.8%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 45.0 5.25e-01 70.3% 100.0%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.68 52.0 4.01e-01 100.0% 37.0%
3765289 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 52.0 4.85e-01 82.4% 66.7%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 47.0 3.45e-01 73.0% 33.5%
4881976 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 48.0 4.84e-01 78.4% 74.3%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.68 47.0 4.88e-01 75.7% 77.1%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 46.0 4.51e-01 70.3% 75.0%
3854862 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 51.0 4.71e-01 82.4% 63.2%
164934 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.67 46.0 4.74e-01 74.3% 74.6%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.67 58.0 5.16e-01 98.6% 97.2%
4029082 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 44.0 5.10e-01 98.6% 100.0%
3574238 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 48.0 4.38e-01 82.4% 57.0%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 50.0 4.70e-01 82.4% 66.7%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 48.0 3.43e-01 78.4% 25.8%
3617111 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 52.0 4.89e-01 95.9% 70.0%
3934628 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.75e-01 82.4% 67.8%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 45.0 5.06e-01 73.0% 94.5%
3240406 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.66 57.0 4.95e-01 97.3% 87.8%
3518844 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 49.0 4.76e-01 82.4% 70.6%
3795384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 48.0 3.45e-01 78.4% 28.8%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.64 49.0 5.24e-01 97.3% 92.3%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.64 44.0 3.62e-01 71.6% 68.9%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 44.0 3.62e-01 70.3% 70.8%
4927654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.37e-01 100.0% 98.5%
4942017 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.63 52.0 4.48e-01 90.5% 95.7%
4962256 101.1.2.937 alpha arrays › HTH › HTH › winged helix domain › PF25943 0.62 57.0 4.90e-01 98.6% 75.5%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.61 52.0 4.44e-01 97.3% 82.4%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.60 52.0 4.43e-01 98.6% 84.0%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.45e-01 98.6% 93.0%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.59 50.0 4.32e-01 97.3% 89.2%
3604264 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.63e-01 97.3% 78.0%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.58 51.0 4.37e-01 98.6% 86.7%
3254426 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 38.0 3.24e-01 79.7% 83.0%
3378005 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 41.0 2.84e-01 93.2% 97.2%