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MN508817.1__QFR55763.1__JC221_117__00117
Bact-VirMN508817.1__QFR55763.1__JC221_117__00117
Identity
- Accession:
- MN508817 ↗
- Kingdom:
- phage
Quality
67.8
mean pLDDT
Taxonomy
TaxID: 2654973
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-128
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 51.0 | 4.78e-01 | 100.0% | 69.9% |
| 5swiD01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 48.0 | 3.67e-01 | 88.7% | 53.3% |
| 4mmhA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 46.0 | 3.40e-01 | 87.7% | 62.1% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 40.0 | 3.10e-01 | 75.5% | 93.0% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.54 | 45.0 | 4.53e-01 | 93.4% | 88.1% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 40.0 | 3.16e-01 | 80.2% | 94.6% |
| 4bq6F00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 44.0 | 3.94e-01 | 89.6% | 94.6% |
| 3of7A00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.51 | 39.0 | 2.61e-01 | 82.1% | 31.1% |
| 1fbnA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 24.0 | 3.10e-01 | 79.2% | 84.3% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 3.13e-01 | 93.4% | 92.2% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.50 | 30.0 | 3.59e-01 | 70.8% | 92.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032093 | 3264.1.1.0 ↗ | 0.73 | 56.0 | 4.96e-01 | 99.1% | 57.3% | |
| 4460735 | 3264.1.1.0 ↗ | 0.71 | 53.0 | 4.68e-01 | 100.0% | 54.2% | |
| 1842240 | 3264.1.1.0 ↗ | 0.69 | 51.0 | 4.50e-01 | 97.2% | 53.2% | |
| 4031368 | 3264.1.1.0 ↗ | 0.68 | 55.0 | 4.97e-01 | 98.1% | 63.4% | |
| 3708861 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.57 | 44.0 | 3.86e-01 | 81.1% | 71.3% |
| 4265125 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.56 | 34.0 | 3.83e-01 | 83.0% | 80.0% |
| 3771735 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.55 | 48.0 | 3.84e-01 | 94.3% | 67.6% |
| 4436313 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 41.0 | 4.41e-01 | 89.6% | 94.4% |
| 3269320 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 42.0 | 3.89e-01 | 84.9% | 65.2% |
| 3892945 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 47.0 | 3.70e-01 | 94.3% | 65.6% |
| 4001272 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.54 | 45.0 | 2.95e-01 | 100.0% | 20.3% |
| 3297423 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.53 | 45.0 | 2.84e-01 | 94.3% | 93.7% |
| 3929050 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.53 | 42.0 | 4.15e-01 | 91.5% | 79.1% |
| 5052130 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.53 | 43.0 | 2.87e-01 | 99.1% | 22.4% |
| 3872625 | 11.1.1.787 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C | 0.52 | 45.0 | 3.49e-01 | 94.3% | 70.6% |
| 5010477 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.52 | 39.0 | 4.01e-01 | 97.2% | 83.0% |
| 3889236 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.52 | 46.0 | 4.09e-01 | 94.3% | 89.7% |
| 3245738 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 42.0 | 4.19e-01 | 92.5% | 85.5% |
| 3710689 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.51 | 38.0 | 3.92e-01 | 95.3% | 83.0% |
| 3215596 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 41.0 | 3.13e-01 | 85.8% | 48.2% |
| 3992359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.51 | 41.0 | 4.19e-01 | 100.0% | 91.0% |
| 3737178 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.51 | 41.0 | 4.16e-01 | 88.7% | 88.6% |
| 3378755 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 41.0 | 3.90e-01 | 87.7% | 87.2% |
| 3565087 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.50 | 42.0 | 3.52e-01 | 91.5% | 73.0% |
| 3538099 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.50 | 43.0 | 3.64e-01 | 94.3% | 75.6% |
| 3403106 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.50 | 42.0 | 3.67e-01 | 93.4% | 78.2% |