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MN508817.1__QFR55824.1__JC221_178__00178
Bact-VirMN508817.1__QFR55824.1__JC221_178__00178
Identity
- Accession:
- MN508817 ↗
- Kingdom:
- phage
Quality
96.6
mean pLDDT
Taxonomy
TaxID: 2654973
Cluster
View cluster (69 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-164
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 40.0 | 5.10e-01 | 100.0% | 90.7% |
| 1z4mA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.72 | 58.0 | 6.26e-01 | 99.4% | 97.1% |
| 3tnjA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 49.0 | 5.61e-01 | 90.8% | 95.0% |
| 3fdxA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 51.0 | 5.68e-01 | 89.6% | 97.6% |
| 3u7eB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.66 | 59.0 | 5.53e-01 | 95.1% | 84.7% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 44.0 | 4.84e-01 | 92.6% | 85.7% |
| 3sp1A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 53.0 | 4.42e-01 | 93.3% | 89.5% |
| 4ycsA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 42.0 | 4.80e-01 | 98.8% | 96.7% |
| 1pzxB01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.59 | 37.0 | 4.18e-01 | 98.8% | 82.8% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 33.0 | 3.62e-01 | 85.3% | 65.6% |
| 2yfkA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.59 | 39.0 | 3.72e-01 | 99.4% | 57.7% |
| 5o9fA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 4.38e-01 | 100.0% | 83.2% |
| 2xecC00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 49.0 | 4.33e-01 | 90.8% | 97.1% |
| 3zvkA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.58 | 45.0 | 4.98e-01 | 90.2% | 98.5% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 43.0 | 4.35e-01 | 90.8% | 80.4% |
| 1d5wA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 40.0 | 4.54e-01 | 100.0% | 95.1% |
| 4c4aA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 4.22e-01 | 71.8% | 99.3% |
| 1e3jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 4.33e-01 | 98.2% | 87.0% |
| 6hq7B02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.55 | 48.0 | 4.18e-01 | 96.3% | 87.3% |
| 2acvA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 50.0 | 4.21e-01 | 98.2% | 96.7% |
| 3c85A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 4.19e-01 | 92.6% | 81.3% |
| 3tmaA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 39.0 | 3.86e-01 | 73.0% | 96.0% |
| 1z85B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 44.0 | 4.57e-01 | 98.8% | 92.6% |
| 3a2kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 37.0 | 4.02e-01 | 100.0% | 83.7% |
| 5dxfA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 49.0 | 4.55e-01 | 100.0% | 79.7% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 4.48e-01 | 85.9% | 89.8% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.53 | 40.0 | 4.21e-01 | 99.4% | 84.9% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 46.0 | 4.28e-01 | 94.5% | 75.4% |
| 4aeeA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.81e-01 | 100.0% | 96.3% |
| 1hyeA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 4.46e-01 | 100.0% | 95.9% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 46.0 | 4.18e-01 | 96.9% | 88.6% |
| 3e3mA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 43.0 | 4.53e-01 | 93.9% | 99.3% |
| 4l07A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 45.0 | 4.19e-01 | 98.2% | 88.0% |
| 4j3cB02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.50 | 44.0 | 4.44e-01 | 98.2% | 94.5% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018983 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.80 | 76.0 | 7.34e-01 | 100.0% | 92.2% |
| 5078078 | 2006.1.1.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B | 0.78 | 73.0 | 6.74e-01 | 100.0% | 97.0% |
| 1144914 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.77 | 72.0 | 6.74e-01 | 99.4% | 98.0% |
| 3502769 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.77 | 63.0 | 6.78e-01 | 93.9% | 99.3% |
| 3868100 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.77 | 72.0 | 6.66e-01 | 99.4% | 95.0% |
| 4290919 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.75 | 71.0 | 6.87e-01 | 100.0% | 97.2% |
| 5032548 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.75 | 70.0 | 6.69e-01 | 99.4% | 97.8% |
| 5001495 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.75 | 67.0 | 6.70e-01 | 95.1% | 100.0% |
| 4032470 | 2006.1.1.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NT5C | 0.74 | 68.0 | 6.55e-01 | 96.9% | 95.0% |
| 4056922 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.74 | 54.0 | 6.07e-01 | 90.8% | 96.8% |
| 3261893 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.70 | 50.0 | 5.75e-01 | 89.6% | 98.4% |
| 5024633 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.69 | 52.0 | 5.54e-01 | 90.2% | 89.3% |
| 3413263 | 2006.1.1.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Put_Phosphatase | 0.69 | 63.0 | 5.54e-01 | 98.8% | 98.3% |
| 5040746 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.68 | 51.0 | 5.62e-01 | 90.8% | 96.9% |
| 4996206 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 50.0 | 5.44e-01 | 89.6% | 92.5% |
| 4157810 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 48.0 | 5.36e-01 | 88.3% | 94.4% |
| 3413517 | 2007.1.2.31 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LBD_receptor | 0.67 | 48.0 | 4.52e-01 | 73.6% | 99.5% |
| 4985079 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 51.0 | 5.51e-01 | 90.8% | 95.6% |
| 3964816 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.66 | 46.0 | 4.67e-01 | 90.8% | 71.5% |
| 5030602 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.65 | 35.0 | 4.06e-01 | 96.3% | 70.6% |
| 3955971 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.65 | 46.0 | 5.10e-01 | 89.6% | 90.8% |
| 3970680 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 46.0 | 5.18e-01 | 90.2% | 97.6% |
| 3609329 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.62 | 56.0 | 5.17e-01 | 97.5% | 83.9% |
| 3395584 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.61 | 47.0 | 4.81e-01 | 90.8% | 81.9% |
| 3479417 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.61 | 49.0 | 5.27e-01 | 89.6% | 98.6% |
| 4990341 | 7542.1.1.7 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › PF28406 | 0.61 | 40.0 | 4.53e-01 | 93.9% | 89.1% |
| 4000045 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 53.0 | 5.01e-01 | 100.0% | 79.5% |
| 3603301 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.60 | 47.0 | 5.05e-01 | 99.4% | 95.7% |
| 4939468 | 7542.1.1.7 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › PF28406 | 0.60 | 39.0 | 4.40e-01 | 93.9% | 86.7% |
| 3940266 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.60 | 42.0 | 3.88e-01 | 72.4% | 100.0% |
| 3702525 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 34.0 | 3.48e-01 | 74.2% | 56.1% |
| 4098681 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.60 | 44.0 | 4.51e-01 | 100.0% | 76.9% |
| 4973306 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.60 | 45.0 | 4.73e-01 | 83.4% | 87.6% |
| None | — | 0.60 | 49.0 | 3.72e-01 | 87.7% | 87.1% | |
| 4972770 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.59 | 52.0 | 4.89e-01 | 100.0% | 79.0% |
| 3245213 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 31.0 | 3.74e-01 | 74.2% | 76.9% |
| 5058638 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 53.0 | 4.82e-01 | 100.0% | 73.2% |
| 3292430 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.58 | 47.0 | 3.54e-01 | 87.1% | 79.4% |
| 3311403 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.58 | 47.0 | 3.58e-01 | 87.7% | 77.8% |
| 5061987 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.57 | 44.0 | 4.75e-01 | 96.3% | 97.0% |
| 3426498 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 49.0 | 4.19e-01 | 93.9% | 90.8% |
| 5023830 | 2484.1.1.70 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FtsA | 0.56 | 44.0 | 4.23e-01 | 84.7% | 90.5% |
| 3672808 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.55 | 39.0 | 4.37e-01 | 100.0% | 93.6% |
| 4666944 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 47.0 | 4.27e-01 | 91.4% | 70.9% |
| 3888613 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 44.0 | 3.71e-01 | 85.9% | 98.9% |
| 4029780 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 43.0 | 3.88e-01 | 85.9% | 98.7% |
| 3787994 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.53 | 47.0 | 3.81e-01 | 97.5% | 79.0% |
| 3863266 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.53 | 43.0 | 3.68e-01 | 85.9% | 93.7% |
| 4044113 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.52 | 43.0 | 4.53e-01 | 88.3% | 99.3% |
| 4346140 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.52 | 45.0 | 3.89e-01 | 90.8% | 63.3% |
| 4446404 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.52 | 48.0 | 3.98e-01 | 100.0% | 98.9% |
| 3726307 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 41.0 | 3.90e-01 | 84.0% | 96.9% |
| 4026842 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.51 | 46.0 | 4.26e-01 | 95.1% | 84.0% |
| 5037967 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.51 | 36.0 | 3.47e-01 | 71.8% | 75.8% |
| 4973581 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 46.0 | 3.84e-01 | 100.0% | 74.4% |