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MN508817.1__QFR55858.1__JC221_212__00212
Bact-VirMN508817.1__QFR55858.1__JC221_212__00212
Identity
- Accession:
- MN508817 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Taxonomy
TaxID: 2654973
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
rep: NC_029013.1__YP_009218746.1__AVU18_gp176__00208__D176-242
D2
high
residues 129-215
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ezqA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.70 | 48.0 | 4.36e-01 | 71.3% | 79.1% |
| 3f0zA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.58 | 28.0 | 3.51e-01 | 72.4% | 76.5% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 37.0 | 3.40e-01 | 77.0% | 52.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784180 | 3416.1.1.1 ↗ | a+b complex topology › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Gal11_ABD1 | 0.68 | 46.0 | 4.72e-01 | 70.1% | 95.3% |
| 4135668 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.61 | 48.0 | 3.53e-01 | 83.9% | 37.8% |
| 3925204 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 27.0 | 2.60e-01 | 74.7% | 36.0% |
| 5079816 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.56 | 39.0 | 3.49e-01 | 72.4% | 64.2% |
| 3254598 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.56 | 40.0 | 4.42e-01 | 75.9% | 94.3% |
| 1756776 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.55 | 41.0 | 2.93e-01 | 80.5% | 62.4% |
| 4950238 | 192.5.1.39 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF4405 | 0.53 | 39.0 | 4.01e-01 | 92.0% | 78.8% |