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MN534320.1__QGJ84746.1__X__00050
Bact-VirMN534320.1__QGJ84746.1__X__00050
Identity
- Accession:
- MN534320 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-139
Domain cluster:
rep: MZ333134.1__QXG07748.1__X__00016__D390-489
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08931.16 best | Caudo_bapla_RBP | 60.9 | 1.40e-16 | 99.1% | 97.0% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.97 | 87.0 | 8.83e-01 | 100.0% | 93.5% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.95 | 83.0 | 8.54e-01 | 100.0% | 94.2% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.75 | 34.0 | 3.46e-01 | 100.0% | 43.9% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.69 | 63.0 | 6.29e-01 | 100.0% | 98.2% |
| 2dh2A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 49.0 | 5.24e-01 | 99.1% | 96.7% |
| 7o0eA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 46.0 | 5.04e-01 | 98.1% | 98.8% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 45.0 | 4.89e-01 | 97.2% | 96.6% |
| 4nzfD02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 43.0 | 4.57e-01 | 99.1% | 92.2% |
| 3cc1A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 43.0 | 4.62e-01 | 99.1% | 96.6% |
| 1uasA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 42.0 | 4.55e-01 | 100.0% | 96.6% |
| 6ibkA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 45.0 | 4.73e-01 | 99.1% | 99.0% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 40.0 | 4.36e-01 | 99.1% | 96.6% |
| 3a5vA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 4.55e-01 | 96.3% | 96.0% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 34.0 | 4.01e-01 | 98.1% | 100.0% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 42.0 | 3.79e-01 | 85.2% | 76.1% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 41.0 | 3.86e-01 | 84.3% | 85.2% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 43.0 | 3.69e-01 | 99.1% | 62.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.97 | 88.0 | 8.64e-01 | 100.0% | 88.5% |
| 961561 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.94 | 83.0 | 8.54e-01 | 100.0% | 95.1% |
| 3588403 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.79 | 69.0 | 7.11e-01 | 100.0% | 98.1% |
| 184600 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.69 | 63.0 | 6.29e-01 | 100.0% | 98.2% |
| 3388825 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 51.0 | 5.54e-01 | 100.0% | 95.6% |
| 4221218 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 50.0 | 5.31e-01 | 100.0% | 89.5% |
| 3403550 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 51.0 | 5.24e-01 | 100.0% | 86.0% |
| 3397295 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 50.0 | 5.50e-01 | 99.1% | 100.0% |
| 2630328 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 49.0 | 5.36e-01 | 100.0% | 97.7% |
| 3391207 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 49.0 | 5.28e-01 | 100.0% | 95.5% |
| 3894799 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 48.0 | 5.13e-01 | 100.0% | 94.4% |
| 3411859 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.64 | 46.0 | 5.13e-01 | 98.1% | 100.0% |
| 4008097 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 40.0 | 4.82e-01 | 97.2% | 100.0% |
| 4265807 | 77.1.1.4 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Chitin_bind_4 | 0.63 | 31.0 | 3.72e-01 | 100.0% | 70.0% |
| 3970232 | 12.1.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF3459 | 0.63 | 42.0 | 4.85e-01 | 100.0% | 100.0% |
| 1248302 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 46.0 | 4.81e-01 | 98.1% | 87.8% |
| 3415714 | 79.1.1.23 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Chitin_bind_4 | 0.61 | 32.0 | 3.76e-01 | 99.1% | 73.3% |
| 3389299 | 12.1.1.60 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Chitin_bind_4 | 0.60 | 31.0 | 3.59e-01 | 100.0% | 67.5% |
| 1412508 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.59 | 43.0 | 4.59e-01 | 100.0% | 92.3% |
| 3398140 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.57 | 30.0 | 3.55e-01 | 100.0% | 73.3% |
| 3353112 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.56 | 42.0 | 4.52e-01 | 100.0% | 97.8% |
| 3268021 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.55 | 42.0 | 4.42e-01 | 100.0% | 95.8% |
| 1140101 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.54 | 41.0 | 4.36e-01 | 100.0% | 96.7% |
| 3698469 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.54 | 47.0 | 3.79e-01 | 100.0% | 56.1% |
| 3252050 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 47.0 | 3.87e-01 | 100.0% | 96.7% |
| 4107504 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 46.0 | 3.77e-01 | 100.0% | 57.7% |
| 4949296 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.52 | 43.0 | 3.94e-01 | 95.4% | 95.5% |