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QGH71254.1

Arc-Vir

MN539721__QGH71254.1__X__00024

Identity

Accession:
MN539721 ↗
Protein ID:
QGH71254.1 ↗
Kingdom:
archaea

Quality

63.3 mean pLDDT

Taxonomy

Fuselloviridae› Sulfolobus_super-elliptical_virus

TaxID: 2655037

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-216
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.79 60.0 6.60e-01 93.7% 97.1%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.76 55.0 6.13e-01 88.9% 95.9%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 53.0 5.98e-01 86.5% 96.8%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 54.0 6.07e-01 89.7% 99.0%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 57.0 5.98e-01 92.9% 90.4%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 56.0 5.90e-01 90.5% 93.8%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 51.0 5.35e-01 88.9% 83.5%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.68 33.0 3.91e-01 89.7% 66.3%
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 47.0 5.31e-01 86.5% 96.8%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 59.0 5.68e-01 94.4% 85.0%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.64 57.0 4.93e-01 100.0% 63.2%
2ou3A01 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.62 53.0 4.98e-01 92.1% 81.8%
2o1eB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 44.0 4.12e-01 76.2% 90.1%
3qybA02 1.10.8.270 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains 0.59 36.0 4.07e-01 90.5% 80.6%
1ka1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.58 41.0 3.41e-01 73.0% 47.9%
2dbaA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 38.0 3.92e-01 100.0% 74.6%
2qq8A02 1.10.8.270 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains 0.55 34.0 3.79e-01 85.7% 79.2%
1kpgD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.16e-01 77.8% 97.9%
4ag6A02 1.10.8.730 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 41.0 4.37e-01 84.9% 93.6%
7szaA01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 37.0 3.71e-01 84.1% 69.6%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.73e-01 74.6% 77.0%
6mgiA03 1.20.1440.90 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Phosphoenolpyruvate/pyruvate domain 0.52 36.0 3.54e-01 70.6% 92.0%
2f33A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 29.0 3.73e-01 73.8% 97.2%
6hwjA01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.52 40.0 3.25e-01 82.5% 84.6%
2pv4A00 1.10.3440.10 Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like 0.51 40.0 3.87e-01 83.3% 87.6%
2q0tB01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.51 41.0 3.30e-01 85.7% 70.7%
2vxxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 35.0 3.25e-01 73.0% 73.8%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4485423 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.78 60.0 6.16e-01 92.1% 84.2%
3389111 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 58.0 5.45e-01 94.4% 72.0%
3853197 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.70 65.0 5.72e-01 100.0% 84.8%
3253633 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.70 52.0 5.17e-01 90.5% 75.4%
5053357 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.70 55.0 5.24e-01 92.9% 70.7%
3595452 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 57.0 5.30e-01 92.9% 71.0%
3918148 101.1.10.33 ↗ alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.65 54.0 4.93e-01 90.5% 94.7%
4328339 101.1.10.33 ↗ alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.64 54.0 4.84e-01 92.1% 96.0%
3996453 180.1.1.6 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › FIT 0.59 50.0 4.55e-01 92.9% 97.1%
4966006 2498.1.1.163 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF5781 0.57 45.0 3.66e-01 83.3% 77.1%
4985982 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.56 35.0 3.51e-01 85.7% 59.2%
4960778 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.55 48.0 3.33e-01 100.0% 69.8%
3736901 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.54 41.0 2.84e-01 80.2% 25.2%
3876932 592.3.1.8 ↗ alpha arrays › PWI domain-like › N-terminal domain of egg case silk protein TuSp1 › N-terminal domain of egg case silk protein TuSp1 › PF31020 0.54 37.0 3.97e-01 77.8% 82.9%
4941209 604.39.1.3 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS 0.54 43.0 3.99e-01 84.9% 88.1%
3590231 162.1.1.0 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.53 37.0 4.02e-01 71.4% 94.3%
3750409 186.1.1.24 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › PF31020 0.53 37.0 3.94e-01 77.8% 85.7%
3250954 5051.1.1.6 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.52 44.0 3.10e-01 91.3% 94.9%
3494317 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.49e-01 93.7% 66.5%
3314085 5051.1.1.7 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp 0.51 44.0 3.09e-01 98.4% 94.4%
4021306 133.1.1.0 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) 0.51 37.0 3.20e-01 77.8% 87.1%
4084856 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.51 42.0 2.94e-01 92.9% 84.3%
5071234 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.50 40.0 3.45e-01 85.7% 96.0%