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MN545971.1__QGF21242.1__HCF1_43__00043
Bact-VirMN545971.1__QGF21242.1__HCF1_43__00043
Identity
- Accession:
- MN545971 ↗
- Kingdom:
- phage
Quality
62.2
mean pLDDT
Taxonomy
TaxID: 2849700
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-133
Domain cluster:
rep: KY629563.1__ARK07422.1__LAV_00022__00022__D6-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00877.26 best | NLPC_P60 | 38.1 | 1.70e-09 | 91.0% | 79.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 70.0 | 6.72e-01 | 100.0% | 84.6% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 66.0 | 6.27e-01 | 100.0% | 83.7% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.72 | 65.0 | 6.31e-01 | 99.1% | 88.4% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.71 | 64.0 | 6.11e-01 | 99.1% | 97.7% |
| 4hz9A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.70 | 61.0 | 6.01e-01 | 100.0% | 87.3% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.69 | 64.0 | 5.96e-01 | 100.0% | 82.1% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.69 | 64.0 | 5.73e-01 | 100.0% | 77.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 60.0 | 5.57e-01 | 100.0% | 90.8% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.66 | 62.0 | 5.80e-01 | 100.0% | 82.2% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.66 | 62.0 | 5.39e-01 | 100.0% | 73.3% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 55.0 | 3.99e-01 | 100.0% | 97.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 51.0 | 4.97e-01 | 98.2% | 84.0% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.55 | 39.0 | 3.94e-01 | 73.9% | 82.3% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 26.0 | 3.60e-01 | 85.6% | 100.0% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 35.0 | 4.02e-01 | 100.0% | 91.3% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 36.0 | 3.71e-01 | 99.1% | 75.0% |
| 1lmeA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.51 | 39.0 | 3.56e-01 | 82.0% | 77.9% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 22.0 | 3.07e-01 | 92.8% | 100.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.51 | 27.0 | 3.39e-01 | 79.3% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.94e-01 | 95.5% | 100.0% |
| 1rl4B00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.51 | 40.0 | 3.58e-01 | 82.9% | 75.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968700 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.91 | 88.0 | 7.96e-01 | 100.0% | 94.3% |
| 3975571 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.91 | 88.0 | 7.08e-01 | 100.0% | 60.0% |
| 3947596 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.89 | 85.0 | 7.89e-01 | 100.0% | 86.7% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 77.0 | 7.00e-01 | 100.0% | 84.6% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.78 | 70.0 | 6.57e-01 | 100.0% | 80.0% |
| 4373825 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.77 | 66.0 | 6.40e-01 | 100.0% | 82.3% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.73 | 64.0 | 6.26e-01 | 100.0% | 87.3% |
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.73 | 67.0 | 6.26e-01 | 100.0% | 81.5% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.72 | 66.0 | 6.10e-01 | 99.1% | 79.3% |
| 4277582 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.72 | 67.0 | 6.22e-01 | 100.0% | 83.7% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.72 | 62.0 | 6.00e-01 | 100.0% | 82.4% |
| 3284393 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.71 | 59.0 | 5.57e-01 | 100.0% | 75.2% |
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.70 | 64.0 | 5.97e-01 | 100.0% | 90.4% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.69 | 64.0 | 5.72e-01 | 100.0% | 79.9% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.68 | 62.0 | 5.74e-01 | 100.0% | 92.9% |
| 3970579 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.68 | 62.0 | 5.59e-01 | 100.0% | 91.3% |
| 5064017 | 219.1.1.166 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Amidase_6 | 0.68 | 61.0 | 5.50e-01 | 100.0% | 90.3% |
| 2444014 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.67 | 61.0 | 5.59e-01 | 100.0% | 86.6% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.66 | 59.0 | 5.45e-01 | 100.0% | 88.3% |
| 3718903 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.63 | 55.0 | 3.82e-01 | 100.0% | 71.7% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.60 | 51.0 | 5.21e-01 | 95.5% | 96.2% |
| 3629830 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 39.0 | 4.33e-01 | 97.3% | 90.6% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.55 | 28.0 | 3.67e-01 | 77.5% | 90.0% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 36.0 | 3.88e-01 | 99.1% | 90.0% |
D2
high
residues 146-244