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MN549361.1__QGZ14338.1__RL2RES_162__00162

Bact-Vir

MN549361.1__QGZ14338.1__RL2RES_162__00162

Identity

Accession:
MN549361 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pootjesviridae› Innesvirus› Rhizobium_phage_RL2RES

TaxID: 103371

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
Domain cluster: representative
CATH (73)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.92 77.0 7.29e-01 93.5% 77.5%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 78.0 7.30e-01 95.2% 76.7%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 80.0 5.20e-01 96.8% 24.6%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.91 80.0 6.35e-01 96.8% 50.9%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 82.0 5.30e-01 96.8% 42.2%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.90 70.0 7.18e-01 90.3% 86.4%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.89 78.0 6.63e-01 96.8% 61.1%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.89 75.0 6.34e-01 100.0% 57.7%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.88 81.0 6.77e-01 98.4% 79.0%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.88 74.0 6.12e-01 95.2% 53.8%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 72.0 7.68e-01 87.1% 100.0%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.87 77.0 6.39e-01 95.2% 57.8%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.87 65.0 7.13e-01 82.3% 96.1%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.86 79.0 5.82e-01 98.4% 61.2%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.86 75.0 7.29e-01 95.2% 92.6%
1p49A02 1.10.287.550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 69.0 7.05e-01 93.5% 88.1%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.86 76.0 6.18e-01 96.8% 54.1%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.86 76.0 6.97e-01 96.8% 79.7%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.86 70.0 5.35e-01 96.8% 41.5%
6umqA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.85 74.0 5.87e-01 91.9% 80.9%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.85 79.0 5.69e-01 100.0% 44.2%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.85 73.0 6.35e-01 96.8% 63.7%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.84 71.0 6.23e-01 93.5% 64.4%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.84 72.0 7.28e-01 93.5% 93.5%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.84 65.0 5.06e-01 82.3% 41.1%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 73.0 7.14e-01 96.8% 95.6%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.84 75.0 5.29e-01 96.8% 35.7%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 76.0 5.92e-01 100.0% 57.8%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.83 72.0 4.79e-01 95.2% 25.4%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.83 74.0 6.52e-01 96.8% 74.7%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.82 72.0 6.17e-01 98.4% 62.1%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.82 70.0 6.74e-01 98.4% 81.7%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 75.0 5.52e-01 100.0% 72.0%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 60.0 5.96e-01 77.4% 84.6%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.82 70.0 6.14e-01 93.5% 93.3%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 71.0 5.06e-01 95.2% 34.1%
3nkzA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.81 70.0 6.01e-01 95.2% 60.8%
3t9jA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.81 73.0 5.45e-01 98.4% 78.5%
2cazC00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.81 62.0 6.22e-01 82.3% 95.3%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.81 75.0 6.97e-01 100.0% 86.8%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.81 73.0 5.73e-01 100.0% 51.6%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.80 72.0 5.78e-01 100.0% 70.6%
3fxdC00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.80 60.0 6.60e-01 96.8% 100.0%
3r6nA02 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 70.0 5.23e-01 100.0% 46.5%
7aalA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.79 67.0 4.39e-01 95.2% 23.3%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.79 65.0 5.91e-01 96.8% 67.1%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.79 70.0 5.61e-01 98.4% 50.8%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.79 60.0 6.42e-01 82.3% 100.0%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.78 66.0 4.88e-01 93.5% 36.9%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.78 70.0 4.37e-01 100.0% 64.2%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.77 64.0 6.48e-01 95.2% 95.2%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 68.0 4.63e-01 100.0% 36.0%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.77 67.0 6.47e-01 98.4% 87.1%
2fcwA00 1.20.81.10 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain 0.77 67.0 5.59e-01 96.8% 58.5%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 65.0 6.14e-01 95.2% 97.3%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.76 63.0 6.08e-01 96.8% 78.9%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 65.0 6.20e-01 95.2% 83.3%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.76 63.0 6.17e-01 91.9% 100.0%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 66.0 4.69e-01 100.0% 42.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 64.0 5.50e-01 100.0% 79.2%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.74 63.0 5.58e-01 98.4% 64.9%
3rvyA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.74 63.0 5.23e-01 98.4% 53.5%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 5.35e-01 96.8% 60.8%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 62.0 5.40e-01 98.4% 74.7%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.73 50.0 5.42e-01 95.2% 91.7%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.73 60.0 6.19e-01 95.2% 96.6%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 58.0 5.50e-01 91.9% 87.0%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.72 64.0 5.63e-01 95.2% 73.6%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.72 62.0 5.36e-01 96.8% 62.2%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 57.0 5.39e-01 100.0% 74.0%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 54.0 4.77e-01 93.5% 62.9%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 51.0 4.73e-01 90.3% 70.1%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.63 49.0 5.24e-01 88.7% 100.0%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3633621 192.5.1.16 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PF26729 0.92 86.0 7.78e-01 100.0% 91.3%
4882756 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.92 82.0 6.01e-01 95.2% 40.1%
3548194 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.91 83.0 6.67e-01 96.8% 55.5%
3976663 3812.1.1.1 ↗ alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E 0.90 85.0 8.40e-01 100.0% 95.4%
4663913 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.90 79.0 5.77e-01 93.5% 38.9%
3745112 3755.3.1.298 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ING 0.90 80.0 6.26e-01 95.2% 49.2%
3481594 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.90 81.0 5.52e-01 96.8% 30.8%
3484074 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.90 81.0 6.05e-01 96.8% 42.9%
3489903 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.90 81.0 6.25e-01 96.8% 48.0%
1106555 3812.1.1.1 ↗ alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E 0.90 75.0 7.38e-01 88.7% 95.5%
4017817 3922.1.1.229 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Cep57_MT_bd 0.89 81.0 6.02e-01 96.8% 43.6%
3692994 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.89 83.0 5.14e-01 100.0% 67.9%
2106300 192.4.1.1 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 0.89 74.0 5.78e-01 100.0% 45.1%
4568749 2004.1.1.585 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23 0.89 80.0 4.79e-01 95.2% 16.9%
3204772 192.1.1.31 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › Cep57_MT_bd 0.89 81.0 6.70e-01 96.8% 61.0%
3507551 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.88 83.0 7.01e-01 100.0% 76.8%
3703494 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.88 78.0 6.33e-01 95.2% 53.6%
5029994 192.4.1.1 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 0.88 73.0 7.23e-01 100.0% 84.6%
3484742 3922.1.1.197 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › BBS2_hp 0.88 79.0 7.04e-01 96.8% 71.8%
5025381 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.88 80.0 4.86e-01 96.8% 48.2%
3269590 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.88 79.0 6.30e-01 96.8% 53.0%
3600712 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.88 77.0 6.88e-01 95.2% 69.4%
3944931 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.87 81.0 7.02e-01 100.0% 87.8%
3608116 5086.1.1.177 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › KIF9 0.87 78.0 5.80e-01 96.8% 66.2%
3393794 3922.1.1.211 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC7_C 0.87 77.0 5.86e-01 96.8% 45.2%
3535225 3939.1.1.369 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › PF28341 0.86 77.0 5.22e-01 96.8% 29.8%
3646439 192.8.1.263 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7615 0.86 76.0 6.76e-01 95.2% 69.4%
3784740 3712.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 0.86 76.0 7.15e-01 96.8% 81.3%
3781506 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.86 76.0 5.55e-01 95.2% 38.1%
4944639 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.86 75.0 6.44e-01 95.2% 72.6%
3669701 603.1.1.160 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 14-3-3 0.86 78.0 6.28e-01 100.0% 69.6%
3738041 192.5.1.1 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.86 76.0 6.80e-01 96.8% 84.7%
3582396 109.4.1.1302 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30363 0.85 78.0 5.34e-01 100.0% 36.5%
4947573 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.85 76.0 4.73e-01 96.8% 20.0%
3877003 632.22.1.95 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF28341 0.85 76.0 5.23e-01 96.8% 32.1%
3565979 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.85 78.0 5.13e-01 100.0% 45.7%
4015415 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.85 76.0 5.42e-01 100.0% 44.6%
4142346 5086.1.1.87 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.85 75.0 6.06e-01 95.2% 57.3%
3781013 3291.1.1.170 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › WWC1 0.85 77.0 5.85e-01 98.4% 95.6%
3904130 1203.1.2.1 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 0.85 74.0 5.85e-01 95.2% 49.2%
3812957 606.1.1.13 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › DUF3475 0.84 75.0 4.93e-01 96.8% 26.0%
3845925 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.84 77.0 6.01e-01 100.0% 68.8%
3310476 603.1.1.100 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27017 0.84 77.0 5.95e-01 100.0% 50.8%
3599624 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.84 77.0 4.34e-01 100.0% 52.6%
3611804 5086.1.1.102 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp 0.84 74.0 5.67e-01 95.2% 45.4%
3915908 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.84 73.0 5.94e-01 95.2% 53.6%
4936792 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 74.0 5.12e-01 95.2% 31.9%
3709193 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.83 72.0 4.58e-01 95.2% 22.1%
4106385 3291.1.1.89 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CHD5 0.83 73.0 6.12e-01 95.2% 60.0%
3884763 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 75.0 5.63e-01 100.0% 70.3%
3593272 375.1.9.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase 0.83 75.0 5.70e-01 98.4% 65.9%
3840552 5086.1.1.90 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I 0.83 73.0 5.27e-01 96.8% 37.0%
3899873 632.8.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C 0.83 73.0 5.95e-01 96.8% 56.4%
3482601 2496.1.1.0 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.83 73.0 5.16e-01 96.8% 33.3%
3536875 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.82 71.0 4.50e-01 95.2% 21.1%
3824276 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.82 72.0 5.04e-01 95.2% 56.7%
3963355 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.82 73.0 6.88e-01 98.4% 88.0%
4862474 3291.1.1.4 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 0.82 72.0 5.43e-01 96.8% 43.0%
3756853 174.1.1.43 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.82 73.0 5.13e-01 100.0% 47.4%
5030938 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.81 73.0 5.40e-01 98.4% 41.3%
4411992 3710.1.1.1 ↗ alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 0.81 71.0 5.87e-01 95.2% 57.1%
4479100 192.29.1.244 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CHD5 0.81 70.0 5.82e-01 95.2% 56.2%
4363885 3922.1.1.139 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › CHD5 0.81 71.0 5.92e-01 96.8% 57.1%
4029478 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.81 71.0 5.89e-01 96.8% 58.1%
3894262 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.81 69.0 4.35e-01 95.2% 20.3%
3937673 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.80 69.0 4.30e-01 96.8% 24.8%
3838686 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.79 66.0 6.77e-01 93.5% 100.0%
3680657 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.78 70.0 4.23e-01 100.0% 30.4%
3363809 4177.1.1.8 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.77 68.0 4.50e-01 100.0% 48.2%
3478399 604.8.1.0 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo 0.76 65.0 4.38e-01 96.8% 27.0%
5002089 2004.1.1.144 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.72 59.0 3.80e-01 95.2% 18.7%
3584217 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.70 60.0 4.92e-01 95.2% 58.3%
3853566 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.63 57.0 4.60e-01 100.0% 59.1%