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MN563784.1__QGK89956.1__X__00146

Bact-Vir

MN563784.1__QGK89956.1__X__00146

Identity

Accession:
MN563784 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phikzvirus› Pseudomonas_phage_vB_PA32_GUMS

TaxID: 2656516

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-71
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 62.0 6.51e-01 100.0% 98.2%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 64.0 4.41e-01 100.0% 27.5%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 57.0 5.74e-01 100.0% 79.0%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 61.0 6.32e-01 100.0% 91.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 61.0 5.95e-01 100.0% 79.4%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 63.0 6.49e-01 100.0% 98.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 62.0 5.75e-01 100.0% 70.9%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 60.0 6.26e-01 100.0% 94.7%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 62.0 6.23e-01 100.0% 89.1%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 60.0 5.46e-01 100.0% 65.5%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 48.0 5.58e-01 76.2% 95.5%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 65.0 6.48e-01 100.0% 93.8%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 61.0 5.79e-01 100.0% 76.0%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 59.0 5.86e-01 100.0% 84.6%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 6.29e-01 100.0% 93.2%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 66.0 6.53e-01 100.0% 100.0%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 60.0 6.05e-01 100.0% 90.5%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 59.0 5.36e-01 100.0% 65.9%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.53e-01 100.0% 84.5%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 52.0 5.23e-01 98.4% 73.8%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 6.03e-01 100.0% 91.9%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 6.01e-01 100.0% 95.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 6.13e-01 100.0% 92.2%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 6.17e-01 100.0% 100.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 5.95e-01 100.0% 93.4%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 62.0 5.88e-01 100.0% 81.1%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 5.87e-01 100.0% 91.8%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 6.21e-01 100.0% 92.5%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 6.11e-01 100.0% 90.9%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 5.80e-01 100.0% 86.4%
1mv3A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 5.97e-01 100.0% 93.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 6.13e-01 100.0% 91.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.84e-01 100.0% 88.1%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.78e-01 100.0% 98.2%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.96e-01 100.0% 92.4%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 59.0 5.80e-01 100.0% 91.2%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 4.88e-01 96.8% 100.0%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 59.0 5.90e-01 100.0% 98.5%
4wsiA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.37e-01 93.7% 95.5%
3qexA06 3.40.1820.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease H-like motif › DnaQ-like 3'-5' exonuclease 0.64 49.0 4.40e-01 85.7% 85.9%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 56.0 5.27e-01 100.0% 84.2%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 55.0 5.54e-01 100.0% 98.4%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 45.0 4.40e-01 79.4% 92.9%
1pnjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 52.0 4.79e-01 100.0% 83.7%
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.60 43.0 4.45e-01 100.0% 81.0%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 51.0 4.77e-01 100.0% 77.1%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 52.0 4.74e-01 100.0% 76.2%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.57 49.0 4.72e-01 100.0% 89.2%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 39.0 3.80e-01 79.4% 100.0%
1ynjD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 32.0 3.42e-01 74.6% 69.8%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.58e-01 93.7% 69.2%
1eujA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 41.0 3.23e-01 100.0% 56.1%
6p0cA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 42.0 3.33e-01 100.0% 93.9%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3284223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 62.0 6.03e-01 100.0% 74.3%
3211367 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 67.0 5.91e-01 100.0% 63.3%
3579728 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.79 67.0 6.45e-01 100.0% 82.9%
157818 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.80e-01 100.0% 63.7%
4376886 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.78 70.0 6.49e-01 100.0% 83.7%
3482676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.69e-01 100.0% 96.7%
4138935 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.76 70.0 6.57e-01 100.0% 88.0%
279006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 63.0 6.13e-01 100.0% 82.6%
3698280 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 62.0 5.30e-01 98.4% 56.0%
3413864 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 66.0 4.79e-01 100.0% 36.4%
3176049 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.75 56.0 5.44e-01 100.0% 72.5%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 6.27e-01 100.0% 84.3%
3270256 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 61.0 6.35e-01 100.0% 96.6%
3234274 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 62.0 6.00e-01 100.0% 81.4%
3773481 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 64.0 5.87e-01 100.0% 73.8%
3620933 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 62.0 5.76e-01 100.0% 72.5%
3495656 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 60.0 6.19e-01 98.4% 93.3%
4043121 4.1.1.36 ↗ beta barrels › SH3 › SH3 › SH3 › FeThRed_A 0.74 66.0 6.34e-01 100.0% 93.2%
3926207 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 55.0 5.98e-01 100.0% 94.3%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 61.0 5.43e-01 100.0% 64.0%
3218217 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 63.0 6.42e-01 96.8% 96.7%
3991896 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 66.0 5.72e-01 100.0% 65.3%
3218647 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 6.13e-01 100.0% 85.7%
4052296 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.73 57.0 5.64e-01 82.5% 86.2%
1290375 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.73 66.0 6.44e-01 100.0% 98.5%
3259043 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 60.0 5.80e-01 100.0% 80.0%
3514345 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 66.0 6.55e-01 100.0% 95.4%
3797970 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 61.0 5.41e-01 100.0% 64.4%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 62.0 5.73e-01 100.0% 73.8%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 62.0 5.49e-01 100.0% 65.6%
3742291 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 60.0 6.02e-01 100.0% 87.7%
3479042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.00e-01 100.0% 84.3%
567 4.1.1.48 ↗ beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.73 53.0 5.56e-01 100.0% 86.0%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 62.0 5.76e-01 100.0% 75.0%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 62.0 6.20e-01 100.0% 92.3%
3523584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 61.0 5.78e-01 100.0% 78.7%
3557677 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 62.0 6.06e-01 100.0% 88.6%
3554670 4.1.1.340 ↗ beta barrels › SH3 › SH3 › SH3 › PF28930 0.72 65.0 5.64e-01 100.0% 75.8%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.72 64.0 5.71e-01 100.0% 72.2%
3172122 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 61.0 6.24e-01 100.0% 100.0%
3323529 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.71 58.0 5.79e-01 100.0% 86.2%
3480204 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 61.0 6.07e-01 100.0% 90.8%
3477037 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 63.0 6.07e-01 100.0% 87.1%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 63.0 5.39e-01 98.4% 96.0%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 62.0 6.18e-01 100.0% 93.8%
3607307 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 62.0 6.03e-01 100.0% 87.1%
3503332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 6.32e-01 98.4% 98.5%
3766868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 60.0 5.32e-01 100.0% 65.6%
3673944 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.70 55.0 4.19e-01 100.0% 36.2%
3205517 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 62.0 5.90e-01 98.4% 85.3%
3995431 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 63.0 5.97e-01 100.0% 85.3%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 63.0 5.97e-01 100.0% 86.7%
None — 0.70 63.0 4.02e-01 100.0% 23.4%
3170649 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.69e-01 100.0% 84.7%
4091791 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.78e-01 98.4% 85.3%
3917464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.76e-01 100.0% 90.8%
3483375 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 5.80e-01 100.0% 85.3%
3736953 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 59.0 5.87e-01 100.0% 93.8%
1320680 4.1.1.115 ↗ beta barrels › SH3 › SH3 › SH3 › LytB_SH3 0.68 58.0 5.74e-01 100.0% 89.6%
3937006 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 5.68e-01 100.0% 87.2%
160765 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 60.0 5.62e-01 100.0% 81.8%
3693741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 60.0 5.83e-01 100.0% 91.3%
3594570 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.12e-01 100.0% 80.0%
3230400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.88e-01 100.0% 95.4%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.67 55.0 5.54e-01 100.0% 92.3%
4335022 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.14e-01 100.0% 69.5%
3475429 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.71e-01 100.0% 92.9%
3585452 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.66 59.0 5.72e-01 100.0% 90.0%
4675879 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 57.0 3.78e-01 100.0% 24.2%
3500084 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 5.61e-01 100.0% 90.0%
3594811 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 58.0 5.75e-01 100.0% 98.5%
3597364 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 3.52e-01 100.0% 18.7%
4951199 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 56.0 5.28e-01 100.0% 82.7%
3252839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 5.24e-01 100.0% 80.0%
3449742 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.63 53.0 5.27e-01 100.0% 87.7%
4939495 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 54.0 5.16e-01 100.0% 87.7%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.72e-01 100.0% 90.9%
3427504 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.60 55.0 5.29e-01 100.0% 92.9%
3492018 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.27e-01 100.0% 59.0%
3640516 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.58 49.0 4.19e-01 100.0% 58.0%
3640801 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.58 49.0 4.53e-01 100.0% 72.5%
3670468 4.1.1.332 ↗ beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.56 50.0 3.95e-01 100.0% 53.8%
3249603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 49.0 4.64e-01 100.0% 82.7%
3736411 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.54 45.0 4.20e-01 100.0% 75.3%
5042697 3053.1.1.1 ↗ beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd 0.51 39.0 2.68e-01 84.1% 98.3%