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MN585195.1__QGF21320.1__X__00002
Bact-VirMN585195.1__QGF21320.1__X__00002
Identity
- Accession:
- MN585195 ↗
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 59.0 | 4.62e-01 | 100.0% | 48.0% |
| 2pmzK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.66 | 31.0 | 3.06e-01 | 86.5% | 41.5% |
| 7l1iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 59.0 | 4.55e-01 | 100.0% | 47.1% |
| 2nnnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 57.0 | 4.68e-01 | 100.0% | 54.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 56.0 | 5.07e-01 | 100.0% | 72.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 56.0 | 5.23e-01 | 100.0% | 91.0% |
| 3cuqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.44e-01 | 79.7% | 96.2% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 54.0 | 4.82e-01 | 100.0% | 72.4% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 53.0 | 4.74e-01 | 100.0% | 77.4% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 53.0 | 4.42e-01 | 100.0% | 70.5% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.75e-01 | 89.2% | 81.7% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 5.02e-01 | 89.2% | 100.0% |
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 40.0 | 4.49e-01 | 85.1% | 100.0% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 49.0 | 4.47e-01 | 97.3% | 79.6% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 51.0 | 4.41e-01 | 100.0% | 68.7% |
| 1ultB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 41.0 | 2.55e-01 | 75.7% | 15.5% |
| 2mh9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 50.0 | 4.20e-01 | 100.0% | 86.6% |
| 4ldgA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.56 | 44.0 | 3.28e-01 | 90.5% | 68.1% |
| 1c7uA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.53 | 30.0 | 3.26e-01 | 82.4% | 65.1% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 35.0 | 3.28e-01 | 70.3% | 84.7% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 37.0 | 3.44e-01 | 75.7% | 84.5% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.52 | 35.0 | 3.65e-01 | 71.6% | 76.1% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 43.0 | 3.67e-01 | 100.0% | 63.2% |
| 3fpwA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.51 | 38.0 | 3.20e-01 | 78.4% | 84.8% |
| 1kqfA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 2.74e-01 | 82.4% | 32.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969012 | 101.1.2.485 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2513 | 0.65 | 58.0 | 5.47e-01 | 100.0% | 86.7% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 57.0 | 4.68e-01 | 100.0% | 56.2% |
| 5010819 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 56.0 | 4.41e-01 | 100.0% | 49.3% |
| 3448910 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.61 | 46.0 | 4.21e-01 | 89.2% | 61.0% |
| 5073929 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 54.0 | 4.74e-01 | 100.0% | 80.0% |
| 1557973 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.61 | 44.0 | 3.81e-01 | 77.0% | 94.0% |
| 3360854 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.59 | 53.0 | 4.52e-01 | 100.0% | 75.8% |
| 3249715 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.59 | 53.0 | 4.46e-01 | 100.0% | 80.8% |
| 3289241 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 52.0 | 4.82e-01 | 100.0% | 83.2% |
| 3471467 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.58 | 47.0 | 4.19e-01 | 97.3% | 61.9% |
| 3284771 | 4107.1.1.2 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › zf-CGNR | 0.57 | 41.0 | 3.26e-01 | 100.0% | 35.6% |
| 4279139 | 3819.2.1.1 ↗ | alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › Csx12 | 0.56 | 48.0 | 2.77e-01 | 100.0% | 11.6% |
| 2782521 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.56 | 32.0 | 3.68e-01 | 77.0% | 76.4% |
| 3587733 | 4980.1.1.0 ↗ | alpha superhelices › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 › Middle domain of Hypothetical protein MPN330 | 0.56 | 39.0 | 3.73e-01 | 74.3% | 66.7% |
| 3991902 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 42.0 | 3.72e-01 | 100.0% | 56.4% |
| 4274656 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.54 | 27.0 | 2.19e-01 | 83.8% | 24.3% |
| 5019906 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.54 | 44.0 | 3.11e-01 | 90.5% | 97.1% |
| 3515407 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 41.0 | 3.22e-01 | 100.0% | 36.9% |
| 3974731 | 601.52.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 | 0.54 | 45.0 | 3.04e-01 | 100.0% | 82.4% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.54 | 46.0 | 3.18e-01 | 100.0% | 33.7% |
| 5080047 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.54 | 37.0 | 2.44e-01 | 71.6% | 58.8% |
| 4961794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 47.0 | 3.99e-01 | 100.0% | 72.8% |
| 3893117 | 101.1.2.564 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27514 | 0.53 | 40.0 | 4.17e-01 | 87.8% | 92.3% |
| 3973365 | 205.1.1.22 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 | 0.53 | 37.0 | 3.46e-01 | 79.7% | 56.8% |
| 3683227 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.52 | 35.0 | 2.62e-01 | 70.3% | 36.6% |
| 3501234 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 37.0 | 2.46e-01 | 78.4% | 32.6% |
| 1713365 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.51 | 44.0 | 3.44e-01 | 100.0% | 47.1% |
| 3240822 | 7523.1.1.20 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd | 0.51 | 37.0 | 2.83e-01 | 81.1% | 30.5% |
| 4219326 | 3754.1.1.1 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 | 0.51 | 41.0 | 2.70e-01 | 91.9% | 43.8% |
| 3810170 | 304.48.1.43 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mitovir_RNA_pol | 0.50 | 37.0 | 2.86e-01 | 79.7% | 47.2% |
| 3993240 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.50 | 44.0 | 3.08e-01 | 100.0% | 50.0% |
| 4025981 | 875.1.1.1 ↗ | a+b two layers › Chorismate synthase, AroC › Chorismate synthase, AroC › Chorismate synthase, AroC › Chorismate_synt | 0.50 | 43.0 | 2.77e-01 | 100.0% | 58.2% |