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MN585195.1__QGF21354.1__X__00036

Bact-Vir

MN585195.1__QGF21354.1__X__00036

Identity

Accession:
MN585195 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_AUS531phi

TaxID: 2663264

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-142_253-290
PDB
Domain cluster: rep: KU517658.1__AMB17415.1__HMT_3__00003__D3-163_284-310
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20505.4 best DUF6731 31.9 1.40e-07 73.6% 32.2%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1afiA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 29.0 4.48e-01 77.0% 100.0%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 30.0 4.37e-01 96.1% 100.0%
2dkhA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.59 30.0 3.66e-01 82.0% 73.7%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 31.0 4.08e-01 71.9% 92.7%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.58 34.0 3.77e-01 99.4% 70.7%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.51 37.0 3.32e-01 74.7% 64.8%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 26.0 3.31e-01 85.4% 84.0%
1pv1A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 3.46e-01 84.3% 96.6%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 25.0 3.05e-01 75.3% 72.9%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.50 33.0 3.66e-01 78.1% 83.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941772 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.75 70.0 7.07e-01 98.9% 98.9%
3451705 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.58 36.0 4.02e-01 97.2% 77.9%
3164780 331.22.1.2 ↗ a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.57 36.0 3.51e-01 70.2% 57.4%
3679520 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.56 31.0 3.36e-01 84.8% 62.7%
3183304 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 38.0 4.12e-01 83.1% 91.0%
3737742 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.51 30.0 3.63e-01 74.7% 90.8%
D2 high residues 144-247
PDB
Domain cluster: rep: MW478289.1__QTZ82801.1__phiCpA_00029__00029__D150-251
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 29.0 3.47e-01 100.0% 51.4%
2qh7B01 3.40.5.90 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › CDGSH iron-sulfur domain, mitoNEET-type 0.58 26.0 3.47e-01 83.7% 85.1%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.57 39.0 3.60e-01 88.5% 52.2%
2yn3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 35.0 4.10e-01 99.0% 88.7%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.57 42.0 4.19e-01 94.2% 73.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 25.0 2.82e-01 99.0% 53.8%
2c4xA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.97e-01 99.0% 83.0%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 35.0 3.73e-01 100.0% 78.7%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.18e-01 93.3% 51.4%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.50 39.0 3.33e-01 86.5% 91.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4965849 3435.1.1.9 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF4747 0.65 56.0 4.22e-01 100.0% 38.4%
4878841 5077.1.1.2 ↗ extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › PsaD 0.59 40.0 3.68e-01 88.5% 53.8%
3177414 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.59 29.0 3.86e-01 86.5% 94.0%
3936578 304.48.1.4 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.50 39.0 3.11e-01 86.5% 70.6%
4327532 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.50 36.0 3.48e-01 85.6% 65.0%
3700950 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.50 44.0 2.78e-01 100.0% 29.3%