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MN585993.1__QGJ90067.1__PBI_INDLULAMITHI_26__00026
Bact-VirMN585993.1__QGJ90067.1__PBI_INDLULAMITHI_26__00026
Identity
- Accession:
- MN585993 ↗
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Taxonomy
TaxID: 2656582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-45_203-277
D2
high
residues 63-201
Domain cluster:
rep: MK061413.1__AZF93752.1__PBI_LIEBE_19__00019__D616-747
D3
high
residues 298-399
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.79 | 62.0 | 5.11e-01 | 97.1% | 48.0% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.71 | 53.0 | 5.21e-01 | 100.0% | 73.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 52.0 | 4.95e-01 | 99.0% | 70.1% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.65 | 59.0 | 5.20e-01 | 100.0% | 97.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 32.0 | 3.92e-01 | 89.2% | 74.6% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 59.0 | 4.90e-01 | 99.0% | 72.7% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 42.0 | 4.58e-01 | 83.3% | 79.1% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.64 | 58.0 | 5.13e-01 | 100.0% | 97.3% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.63 | 23.0 | 3.33e-01 | 80.4% | 70.8% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 46.0 | 4.56e-01 | 100.0% | 72.5% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 54.0 | 5.37e-01 | 100.0% | 89.5% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 3.84e-01 | 84.3% | 67.8% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.60 | 50.0 | 4.67e-01 | 93.1% | 74.4% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.59 | 43.0 | 4.16e-01 | 98.0% | 68.1% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 46.0 | 4.55e-01 | 92.2% | 81.7% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.21e-01 | 83.3% | 91.8% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.73e-01 | 85.3% | 67.3% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.42e-01 | 74.5% | 62.2% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 31.0 | 3.20e-01 | 81.4% | 55.7% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.68e-01 | 84.3% | 64.3% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 38.0 | 3.82e-01 | 84.3% | 71.8% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 4.00e-01 | 86.3% | 77.5% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 35.0 | 3.71e-01 | 83.3% | 75.0% |
| 2j0wA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 32.0 | 3.56e-01 | 83.3% | 75.3% |
| 3c8dA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.17e-01 | 82.4% | 50.0% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.57e-01 | 70.6% | 100.0% |
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.34e-01 | 84.3% | 68.2% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.51 | 39.0 | 3.52e-01 | 81.4% | 92.5% |
| 3n54B01 | 6.20.190.10 | Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 | 0.51 | 27.0 | 3.39e-01 | 86.3% | 85.2% |
| 7rskA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.47e-01 | 84.3% | 66.1% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.45e-01 | 87.3% | 62.1% |
| 2k31A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 38.0 | 3.42e-01 | 81.4% | 81.2% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 40.0 | 3.83e-01 | 88.2% | 79.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943172 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 67.0 | 6.81e-01 | 100.0% | 94.0% |
| 4260084 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 54.0 | 5.14e-01 | 99.0% | 65.0% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 52.0 | 5.69e-01 | 83.3% | 89.4% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.73 | 54.0 | 5.29e-01 | 99.0% | 72.5% |
| 3977382 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 61.0 | 6.30e-01 | 96.1% | 97.9% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 64.0 | 6.42e-01 | 96.1% | 97.1% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 59.0 | 6.13e-01 | 97.1% | 95.8% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 53.0 | 4.97e-01 | 99.0% | 66.7% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 6.08e-01 | 96.1% | 96.2% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.68 | 61.0 | 5.95e-01 | 97.1% | 89.1% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.67 | 53.0 | 5.72e-01 | 83.3% | 98.8% |
| 3978573 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.65 | 58.0 | 5.76e-01 | 98.0% | 96.2% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.64 | 52.0 | 5.00e-01 | 91.2% | 76.5% |
| 4943219 | 205.1.1.123 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD | 0.64 | 43.0 | 3.73e-01 | 82.4% | 44.5% |
| 3948350 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.64 | 57.0 | 5.76e-01 | 100.0% | 100.0% |
| 3438815 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.64 | 40.0 | 4.36e-01 | 86.3% | 76.5% |
| 5067380 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 56.0 | 5.04e-01 | 99.0% | 86.4% |
| 3277271 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 40.0 | 3.90e-01 | 85.3% | 59.1% |
| 4953107 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 41.0 | 4.10e-01 | 83.3% | 67.3% |
| 3737927 | 220.1.1.294 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 | 0.61 | 41.0 | 4.01e-01 | 94.1% | 63.6% |
| 3882479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 42.0 | 3.85e-01 | 83.3% | 54.8% |
| 3650734 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.60 | 49.0 | 4.35e-01 | 92.2% | 62.1% |
| 3247863 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 36.0 | 3.72e-01 | 85.3% | 63.2% |
| 3980899 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 51.0 | 4.99e-01 | 93.1% | 89.1% |
| 3525428 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 40.0 | 3.71e-01 | 83.3% | 53.8% |
| 3253127 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.59 | 36.0 | 3.65e-01 | 85.3% | 59.0% |
| 4245054 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 48.0 | 3.64e-01 | 93.1% | 37.1% |
| 1320672 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 50.0 | 3.72e-01 | 93.1% | 75.7% |
| 3622133 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.58 | 50.0 | 3.74e-01 | 94.1% | 74.8% |
| 3773618 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.57 | 37.0 | 3.33e-01 | 99.0% | 47.9% |
| 3258377 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.56 | 26.0 | 2.83e-01 | 98.0% | 48.9% |
| 3616864 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.54 | 38.0 | 3.81e-01 | 72.5% | 96.2% |
| 3938214 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.54 | 38.0 | 3.46e-01 | 75.5% | 98.6% |
| 3971176 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.53 | 47.0 | 3.94e-01 | 99.0% | 80.6% |
| 4943870 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 46.0 | 4.42e-01 | 96.1% | 94.8% |
| 3805081 | 304.107.1.3 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N | 0.52 | 40.0 | 3.65e-01 | 82.4% | 69.3% |
| 3643001 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 35.0 | 3.30e-01 | 99.0% | 58.3% |
| 4030198 | 304.107.1.3 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N | 0.51 | 39.0 | 3.55e-01 | 83.3% | 62.9% |
| 3660451 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.50 | 40.0 | 3.89e-01 | 84.3% | 98.2% |
| 3596051 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 39.0 | 3.89e-01 | 85.3% | 80.0% |
D4
high
residues 417-512
Domain cluster:
rep: ON755180.1__UVF61144.1__SEA_AOKA_20__00020__D103-198
D5
medium
residues 519-537_601-667
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 47.0 | 5.12e-01 | 97.7% | 70.8% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.77 | 70.0 | 5.48e-01 | 100.0% | 48.6% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.74 | 63.0 | 5.65e-01 | 98.8% | 67.5% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.72 | 58.0 | 5.33e-01 | 97.7% | 67.9% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.71 | 42.0 | 4.24e-01 | 76.7% | 59.3% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.69 | 42.0 | 4.42e-01 | 76.7% | 67.1% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.68 | 61.0 | 5.07e-01 | 98.8% | 95.3% |
| 1nxzA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.68 | 50.0 | 5.43e-01 | 96.5% | 93.1% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.68 | 43.0 | 4.26e-01 | 76.7% | 60.4% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.66 | 57.0 | 5.04e-01 | 98.8% | 66.4% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 59.0 | 4.63e-01 | 98.8% | 71.5% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 4.69e-01 | 98.8% | 71.3% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 53.0 | 5.24e-01 | 96.5% | 82.8% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 4.37e-01 | 97.7% | 67.4% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 53.0 | 5.03e-01 | 95.3% | 76.2% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.62 | 52.0 | 4.05e-01 | 93.0% | 42.6% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 40.0 | 4.23e-01 | 83.7% | 73.1% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.61 | 46.0 | 3.91e-01 | 81.4% | 91.1% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 39.0 | 3.68e-01 | 91.9% | 53.8% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 49.0 | 4.56e-01 | 95.3% | 70.9% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 52.0 | 4.79e-01 | 98.8% | 80.2% |
| 3lyxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 45.0 | 4.09e-01 | 87.2% | 80.0% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 44.0 | 4.20e-01 | 96.5% | 73.0% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 45.0 | 3.76e-01 | 87.2% | 59.5% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.97e-01 | 87.2% | 90.8% |
| 2olnA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 40.0 | 3.26e-01 | 76.7% | 60.8% |
| 3mfxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 43.0 | 3.96e-01 | 84.9% | 78.9% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 4.22e-01 | 88.4% | 91.2% |
| 4gaaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.54 | 45.0 | 3.41e-01 | 88.4% | 48.7% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.44e-01 | 100.0% | 77.9% |
| 3mqqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 43.0 | 3.89e-01 | 86.0% | 79.7% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 42.0 | 3.81e-01 | 87.2% | 79.8% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 41.0 | 3.75e-01 | 86.0% | 78.8% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 44.0 | 4.03e-01 | 94.2% | 78.8% |
| 2aegA02 | 3.90.1680.20 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › | 0.52 | 35.0 | 3.06e-01 | 70.9% | 65.2% |
| 2x3eA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 39.0 | 3.26e-01 | 81.4% | 58.4% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.51 | 41.0 | 3.87e-01 | 96.5% | 70.3% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.51 | 39.0 | 3.02e-01 | 82.6% | 40.7% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 41.0 | 3.91e-01 | 93.0% | 87.9% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041375 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 70.0 | 6.91e-01 | 100.0% | 87.8% |
| 4316037 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.81 | 65.0 | 5.91e-01 | 100.0% | 66.4% |
| 3965594 | 1.1.13.53 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 | 0.78 | 69.0 | 6.67e-01 | 98.8% | 85.3% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.77 | 63.0 | 5.82e-01 | 98.8% | 69.7% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 67.0 | 6.79e-01 | 98.8% | 95.3% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.75 | 65.0 | 5.67e-01 | 98.8% | 64.2% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 59.0 | 5.75e-01 | 98.8% | 77.9% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.73 | 65.0 | 5.74e-01 | 98.8% | 67.2% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 66.0 | 5.81e-01 | 100.0% | 92.8% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 45.0 | 4.34e-01 | 95.3% | 56.8% |
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.72 | 65.0 | 6.30e-01 | 100.0% | 92.6% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 5.91e-01 | 95.3% | 97.9% |
| 3974369 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 5.97e-01 | 100.0% | 94.1% |
| 3730216 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.68 | 59.0 | 5.85e-01 | 98.8% | 92.2% |
| 3968097 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 58.0 | 5.31e-01 | 93.0% | 70.9% |
| 3204458 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.68 | 61.0 | 5.90e-01 | 100.0% | 93.7% |
| 3729936 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.67 | 60.0 | 5.76e-01 | 100.0% | 89.0% |
| 4016863 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.67 | 59.0 | 5.12e-01 | 100.0% | 91.1% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 54.0 | 5.47e-01 | 86.0% | 89.4% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.66 | 52.0 | 4.61e-01 | 90.7% | 59.2% |
| 4934245 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 59.0 | 4.80e-01 | 100.0% | 61.9% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.65 | 54.0 | 5.04e-01 | 95.3% | 73.3% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 58.0 | 5.07e-01 | 97.7% | 79.2% |
| 3965428 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 54.0 | 5.09e-01 | 94.2% | 75.2% |
| 3332690 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 50.0 | 4.81e-01 | 94.2% | 72.0% |
| 3363680 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.64 | 54.0 | 5.01e-01 | 97.7% | 72.7% |
| 4203095 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 56.0 | 3.73e-01 | 98.8% | 72.5% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 55.0 | 4.78e-01 | 97.7% | 75.4% |
| 5049721 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 55.0 | 4.91e-01 | 100.0% | 76.0% |
| 3716467 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.60 | 51.0 | 4.46e-01 | 100.0% | 61.5% |
| 3325109 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.60 | 54.0 | 3.98e-01 | 98.8% | 71.4% |
| 3347068 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.60 | 54.0 | 4.06e-01 | 100.0% | 73.3% |
| 3518863 | 221.1.2.16 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C | 0.60 | 44.0 | 4.15e-01 | 77.9% | 100.0% |
| 3968141 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 45.0 | 4.27e-01 | 81.4% | 96.2% |
| 3264091 | 11.1.1.1038 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SIBA-E_N, Ig_SIBA-E_2nd | 0.59 | 47.0 | 3.55e-01 | 88.4% | 35.1% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 45.0 | 4.44e-01 | 96.5% | 78.9% |
| 4264762 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 53.0 | 3.66e-01 | 100.0% | 67.9% |
| 3594429 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.58 | 46.0 | 4.45e-01 | 86.0% | 80.8% |
| 5053528 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.58 | 44.0 | 3.95e-01 | 81.4% | 89.2% |
| 3247776 | 11.1.1.1038 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SIBA-E_N, Ig_SIBA-E_2nd | 0.58 | 46.0 | 3.47e-01 | 88.4% | 36.1% |
| 2141257 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.57 | 46.0 | 4.05e-01 | 87.2% | 74.4% |
| 3608562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 48.0 | 3.82e-01 | 89.5% | 60.4% |
| 5055172 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.57 | 30.0 | 3.57e-01 | 100.0% | 74.5% |
| 5005721 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.56 | 45.0 | 4.09e-01 | 87.2% | 84.3% |
| 4961960 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.56 | 41.0 | 3.87e-01 | 80.2% | 96.4% |
| 4931358 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.56 | 42.0 | 3.81e-01 | 81.4% | 90.0% |
| 5044348 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.55 | 44.0 | 4.12e-01 | 87.2% | 88.2% |
| 4968256 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 43.0 | 3.80e-01 | 87.2% | 74.1% |
| 3668360 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.55 | 47.0 | 4.16e-01 | 100.0% | 89.6% |
| 4968254 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 43.0 | 3.91e-01 | 87.2% | 79.2% |
| 5049662 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.54 | 43.0 | 3.96e-01 | 87.2% | 81.7% |
| 4395757 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.54 | 44.0 | 3.84e-01 | 88.4% | 73.1% |
| 4938362 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.54 | 43.0 | 4.00e-01 | 87.2% | 86.4% |
| 4015954 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 46.0 | 3.37e-01 | 94.2% | 67.2% |
| 4957163 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.53 | 42.0 | 3.68e-01 | 87.2% | 69.6% |
| 5019134 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 40.0 | 3.40e-01 | 82.6% | 72.0% |
| 5045728 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.53 | 42.0 | 3.71e-01 | 88.4% | 71.5% |
| 3279240 | 223.1.1.42 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_C | 0.52 | 44.0 | 3.96e-01 | 93.0% | 77.5% |
| 4959595 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 42.0 | 3.01e-01 | 87.2% | 35.8% |
| 4960095 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 40.0 | 3.56e-01 | 87.2% | 73.8% |
| 4599597 | 1.1.2.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Peptidase_U4 | 0.51 | 42.0 | 3.90e-01 | 94.2% | 93.0% |
| 4330265 | 304.107.1.3 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N | 0.51 | 39.0 | 3.57e-01 | 83.7% | 68.7% |
| 4246477 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.51 | 40.0 | 3.51e-01 | 87.2% | 70.4% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 43.0 | 3.67e-01 | 94.2% | 81.4% |
D6
medium
residues 541-598
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cddB03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.87 | 73.0 | 7.30e-01 | 100.0% | 88.1% |
| 1wruA03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.84 | 69.0 | 7.05e-01 | 100.0% | 91.1% |
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.73 | 61.0 | 6.12e-01 | 100.0% | 93.3% |
| 1e3mB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.71 | 59.0 | 4.53e-01 | 91.4% | 88.5% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 44.0 | 4.24e-01 | 79.3% | 60.0% |
| 1wmhB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 38.0 | 3.40e-01 | 91.4% | 41.5% |
| 6sjqA00 | 3.10.20.650 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 42.0 | 3.42e-01 | 81.0% | 34.8% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.62 | 51.0 | 4.06e-01 | 93.1% | 100.0% |
| 4o5fA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 51.0 | 4.02e-01 | 94.8% | 100.0% |
| 2qm1B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 49.0 | 3.63e-01 | 87.9% | 93.4% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.61 | 44.0 | 3.02e-01 | 79.3% | 89.9% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.60 | 49.0 | 4.00e-01 | 94.8% | 98.3% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.60 | 49.0 | 4.06e-01 | 96.6% | 99.1% |
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.60 | 44.0 | 3.01e-01 | 79.3% | 91.0% |
| 3maeA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 43.0 | 2.96e-01 | 79.3% | 85.0% |
| 1wx8A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 37.0 | 3.18e-01 | 77.6% | 39.6% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.57 | 46.0 | 3.62e-01 | 86.2% | 85.1% |
| 2z8lA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 40.0 | 3.24e-01 | 77.6% | 45.3% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 38.0 | 2.99e-01 | 74.1% | 35.2% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.59e-01 | 75.9% | 91.8% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 37.0 | 3.27e-01 | 91.4% | 45.4% |
| 3n75A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 43.0 | 3.44e-01 | 94.8% | 94.6% |
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.52 | 38.0 | 3.42e-01 | 79.3% | 56.0% |
| 3ssoA01 | 3.30.1050.30 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › | 0.52 | 46.0 | 3.37e-01 | 98.3% | 67.5% |
| 3w4sA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 37.0 | 2.48e-01 | 93.1% | 16.8% |
| 7drdG01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 41.0 | 2.77e-01 | 94.8% | 97.7% |
| 2i0kA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 32.0 | 2.49e-01 | 100.0% | 28.6% |
| 1wspA00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.51 | 33.0 | 3.01e-01 | 81.0% | 44.6% |
| 1e7uA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 36.0 | 2.66e-01 | 75.9% | 29.3% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.80e-01 | 100.0% | 93.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929759 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 77.0 | 5.42e-01 | 100.0% | 35.6% |
| 119096 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.84 | 69.0 | 7.05e-01 | 100.0% | 91.1% |
| 4049733 | 3071.1.1.8 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › YQBQ | 0.84 | 76.0 | 7.34e-01 | 100.0% | 89.2% |
| 5002661 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.82 | 76.0 | 7.28e-01 | 100.0% | 93.8% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.81 | 71.0 | 6.70e-01 | 96.6% | 91.4% |
| 3973343 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.78 | 70.0 | 6.81e-01 | 100.0% | 90.8% |
| 223697 | 3071.1.1.5 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Gp44-like_3rd | 0.73 | 61.0 | 6.15e-01 | 100.0% | 94.9% |
| 5025598 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 48.0 | 3.70e-01 | 70.7% | 52.3% |
| 3592277 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 62.0 | 4.32e-01 | 100.0% | 96.2% |
| 4944310 | 2003.1.2.301 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › PF26311 | 0.70 | 50.0 | 3.04e-01 | 77.6% | 82.7% |
| 3985510 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.69 | 47.0 | 3.27e-01 | 70.7% | 76.0% |
| 4967645 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.69 | 60.0 | 3.69e-01 | 100.0% | 80.3% |
| 4602886 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.68 | 46.0 | 4.31e-01 | 70.7% | 100.0% |
| 4004431 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 49.0 | 2.93e-01 | 77.6% | 79.5% |
| 5011813 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.67 | 50.0 | 3.04e-01 | 81.0% | 81.0% |
| 4071641 | 2003.1.2.242 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2, FAD_oxidored, PF26311 | 0.66 | 47.0 | 2.82e-01 | 75.9% | 79.1% |
| 4550199 | 2003.1.2.241 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored, NAD_binding_8, PF26311 | 0.66 | 47.0 | 2.83e-01 | 75.9% | 82.9% |
| 5079369 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.65 | 53.0 | 4.05e-01 | 91.4% | 98.6% |
| 5025995 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 46.0 | 2.82e-01 | 77.6% | 78.5% |
| 3707721 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 42.0 | 3.37e-01 | 82.8% | 33.3% |
| 2770682 | 221.1.1.62 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › BILBO1_N | 0.64 | 43.0 | 3.56e-01 | 81.0% | 38.3% |
| 4935292 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.63 | 51.0 | 3.93e-01 | 93.1% | 98.6% |
| 4932232 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.62 | 54.0 | 3.32e-01 | 98.3% | 80.9% |
| 3723997 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 49.0 | 3.34e-01 | 86.2% | 98.5% |
| 3793302 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.61 | 51.0 | 4.05e-01 | 93.1% | 74.6% |
| 3397689 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.61 | 41.0 | 2.97e-01 | 70.7% | 78.1% |
| 5038780 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.60 | 49.0 | 2.92e-01 | 91.4% | 79.3% |
| 4017195 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 46.0 | 3.17e-01 | 82.8% | 97.9% |
| 4977758 | 2003.1.2.301 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › PF26311 | 0.60 | 48.0 | 2.92e-01 | 91.4% | 80.0% |
| 4977337 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.60 | 48.0 | 3.70e-01 | 94.8% | 94.0% |
| 3531987 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 47.0 | 3.18e-01 | 86.2% | 94.3% |
| 3592225 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 38.0 | 3.46e-01 | 81.0% | 45.9% |
| 4949055 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.59 | 44.0 | 3.51e-01 | 81.0% | 47.1% |
| 4943251 | 2484.1.1.329 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_3 | 0.58 | 48.0 | 3.73e-01 | 93.1% | 97.8% |
| 3600134 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 37.0 | 3.13e-01 | 89.7% | 37.0% |
| 5076290 | 2012.1.1.2 ↗ | a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › LigB | 0.57 | 50.0 | 3.29e-01 | 100.0% | 31.5% |
| 3275560 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 46.0 | 3.17e-01 | 89.7% | 95.1% |
| 3637671 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.56 | 38.0 | 2.69e-01 | 72.4% | 66.7% |
| 4007989 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.55 | 44.0 | 2.67e-01 | 91.4% | 79.9% |
| 3201224 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.55 | 38.0 | 3.14e-01 | 70.7% | 97.1% |
| 5045681 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.55 | 44.0 | 3.54e-01 | 100.0% | 74.3% |
| 3625715 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.55 | 48.0 | 3.74e-01 | 96.6% | 70.0% |
| 4581676 | 11.1.4.68 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TcaA_3rd_4th | 0.53 | 37.0 | 3.38e-01 | 87.9% | 56.0% |
| 3715572 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.53 | 42.0 | 2.86e-01 | 94.8% | 76.6% |
| 3582435 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.53 | 35.0 | 3.08e-01 | 72.4% | 42.1% |
| 4376293 | 806.1.1.0 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain | 0.52 | 35.0 | 2.04e-01 | 79.3% | 6.1% |
| 4882488 | 221.3.1.1 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains › IgG_binding_B | 0.52 | 34.0 | 3.40e-01 | 81.0% | 63.1% |
| 5016691 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.51 | 40.0 | 3.51e-01 | 86.2% | 97.6% |
| 2601264 | 7579.1.1.30 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF915 | 0.50 | 40.0 | 2.80e-01 | 100.0% | 93.2% |