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MN585993.1__QGJ90083.1__PBI_INDLULAMITHI_43__00043
Bact-VirMN585993.1__QGJ90083.1__PBI_INDLULAMITHI_43__00043
Identity
- Accession:
- MN585993 ↗
- Kingdom:
- phage
Quality
66.0
mean pLDDT
Taxonomy
TaxID: 2656582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-76
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 59.0 | 4.56e-01 | 71.9% | 35.9% |
| 7e9uA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.80 | 59.0 | 3.44e-01 | 76.6% | 11.1% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 52.0 | 5.03e-01 | 70.3% | 63.0% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 69.0 | 5.15e-01 | 100.0% | 84.8% |
| 6umqA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.70 | 54.0 | 4.48e-01 | 84.4% | 82.6% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 44.0 | 3.85e-01 | 78.1% | 61.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3383427 | 192.17.1.14 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › DUF3755 | 0.79 | 53.0 | 4.95e-01 | 70.3% | 58.7% |
| 3399978 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.77 | 60.0 | 4.58e-01 | 82.8% | 60.7% |
| 3355081 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 52.0 | 4.48e-01 | 70.3% | 51.0% |
| 3774145 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.76 | 59.0 | 4.56e-01 | 87.5% | 39.3% |
| 3799142 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.74 | 60.0 | 5.82e-01 | 89.1% | 80.0% |
| 3906819 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.73 | 59.0 | 4.48e-01 | 90.6% | 38.0% |
| 3504819 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.72 | 57.0 | 5.68e-01 | 87.5% | 83.1% |
| 5063700 | 3843.1.1.32 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › CstA | 0.71 | 61.0 | 4.77e-01 | 93.8% | 68.5% |
| 3472708 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.70 | 64.0 | 4.50e-01 | 100.0% | 83.7% |
| 3375617 | 192.5.1.30 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF641 | 0.69 | 53.0 | 4.94e-01 | 82.8% | 76.2% |
| 4465325 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 51.0 | 3.07e-01 | 82.8% | 38.0% |
| 3596316 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.66 | 57.0 | 3.66e-01 | 95.3% | 80.7% |
| 4267118 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 49.0 | 2.94e-01 | 87.5% | 77.1% |
| 4941316 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.60 | 50.0 | 2.98e-01 | 95.3% | 12.4% |
| 3814758 | 129.1.1.53 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › PRT_C | 0.58 | 50.0 | 3.95e-01 | 95.3% | 68.5% |