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MN585993.1__QGJ90086.1__PBI_INDLULAMITHI_46__00046
Bact-VirMN585993.1__QGJ90086.1__PBI_INDLULAMITHI_46__00046
Identity
- Accession:
- MN585993 ↗
- Kingdom:
- phage
Quality
65.3
mean pLDDT
Taxonomy
TaxID: 2656582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-57
D2
high
residues 69-131
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.64 | 51.0 | 4.79e-01 | 88.9% | 93.6% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 49.0 | 3.47e-01 | 93.7% | 54.9% |
| 7zdtD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 3.04e-01 | 82.5% | 67.0% |
| 2uytA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 47.0 | 3.34e-01 | 98.4% | 91.1% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 37.0 | 3.08e-01 | 71.4% | 36.2% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.57 | 49.0 | 4.12e-01 | 96.8% | 60.6% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.19e-01 | 98.4% | 65.4% |
| 1xr0B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 40.0 | 3.64e-01 | 77.8% | 89.0% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 44.0 | 3.18e-01 | 98.4% | 91.5% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 44.0 | 3.13e-01 | 96.8% | 88.6% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.54 | 42.0 | 3.36e-01 | 90.5% | 70.2% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 46.0 | 3.57e-01 | 98.4% | 89.3% |
| 1itcA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 42.0 | 2.60e-01 | 92.1% | 49.3% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 41.0 | 3.44e-01 | 92.1% | 47.8% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.53 | 38.0 | 3.91e-01 | 79.4% | 86.9% |
| 4ccjA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.52 | 44.0 | 3.02e-01 | 98.4% | 30.1% |
| 2f4nA01 | 3.40.50.10790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | 0.52 | 40.0 | 3.17e-01 | 87.3% | 66.2% |
| 2yg5A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 3.13e-01 | 93.7% | 42.0% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.52 | 39.0 | 3.69e-01 | 85.7% | 85.2% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.52 | 40.0 | 3.59e-01 | 84.1% | 98.9% |
| 2fkbC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 43.0 | 3.16e-01 | 95.2% | 65.3% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.50 | 39.0 | 3.69e-01 | 85.7% | 97.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4464372 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.67 | 52.0 | 4.66e-01 | 93.7% | 60.7% |
| 3224294 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.66 | 45.0 | 2.66e-01 | 71.4% | 30.4% |
| 5036180 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.65 | 50.0 | 4.45e-01 | 90.5% | 56.8% |
| 3250924 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 48.0 | 4.23e-01 | 92.1% | 100.0% |
| 1770149 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.59 | 41.0 | 3.93e-01 | 100.0% | 61.3% |
| 1310612 | 223.1.1.91 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › TraJ | 0.57 | 37.0 | 3.08e-01 | 71.4% | 36.2% |
| 3275614 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.56 | 48.0 | 2.71e-01 | 100.0% | 52.8% |
| 3308182 | 822.1.1.2 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 | 0.56 | 47.0 | 4.28e-01 | 100.0% | 82.2% |
| 3930342 | 822.1.1.2 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 | 0.56 | 41.0 | 4.28e-01 | 79.4% | 100.0% |
| 3295690 | 822.1.1.2 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 | 0.56 | 43.0 | 4.30e-01 | 87.3% | 92.3% |
| 4346634 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.55 | 43.0 | 3.53e-01 | 87.3% | 59.2% |
| 3534502 | 109.4.1.1310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N | 0.53 | 47.0 | 2.65e-01 | 100.0% | 12.6% |
| 3458276 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.53 | 40.0 | 3.97e-01 | 84.1% | 90.8% |
| 3280174 | 223.5.1.0 ↗ | a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like | 0.52 | 37.0 | 3.37e-01 | 93.7% | 55.3% |
| 4028910 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.52 | 38.0 | 3.79e-01 | 81.0% | 84.6% |
| 3695427 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.51 | 39.0 | 3.78e-01 | 85.7% | 78.7% |
| 5051445 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.50 | 42.0 | 3.26e-01 | 96.8% | 43.1% |