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MN585993.1__QGJ90101.1__PBI_INDLULAMITHI_63__00062

Bact-Vir

MN585993.1__QGJ90101.1__PBI_INDLULAMITHI_63__00062

Identity

Accession:
MN585993 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-82
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.76 67.0 5.47e-01 97.5% 83.7%
2x9oA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.75 68.0 4.83e-01 100.0% 72.5%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.75 67.0 5.46e-01 98.7% 85.5%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.75 66.0 5.11e-01 97.5% 84.5%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.69 56.0 4.23e-01 89.9% 91.2%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.69 61.0 4.13e-01 97.5% 85.2%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 50.0 4.30e-01 77.2% 91.9%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.68 48.0 3.63e-01 73.4% 36.8%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 42.0 3.73e-01 83.5% 45.0%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.64 51.0 3.97e-01 89.9% 94.2%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.64 56.0 4.95e-01 97.5% 68.1%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 47.0 4.39e-01 77.2% 67.4%
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.64 48.0 3.64e-01 81.0% 93.6%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.63 48.0 3.17e-01 79.7% 28.5%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 47.0 3.11e-01 81.0% 34.6%
3cwvA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.62 46.0 3.70e-01 77.2% 99.3%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.62 46.0 3.83e-01 78.5% 50.4%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 44.0 2.72e-01 74.7% 31.9%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 45.0 4.08e-01 78.5% 58.3%
1iwlA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.61 46.0 3.59e-01 81.0% 84.2%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 48.0 3.04e-01 84.8% 36.8%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.61 49.0 4.47e-01 88.6% 93.3%
6lgqC01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 45.0 3.86e-01 98.7% 49.6%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.59 45.0 4.37e-01 88.6% 73.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 4.32e-01 74.7% 84.5%
2i0oA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.58 44.0 3.05e-01 82.3% 95.1%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 52.0 3.77e-01 100.0% 68.9%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 40.0 4.22e-01 72.2% 95.8%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.98e-01 96.2% 90.8%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.57 44.0 3.42e-01 87.3% 83.8%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.57 42.0 2.90e-01 81.0% 24.6%
2essA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 40.0 3.71e-01 73.4% 96.0%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 39.0 3.33e-01 72.2% 89.5%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 46.0 3.92e-01 94.9% 53.2%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 4.45e-01 82.3% 98.4%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 47.0 3.25e-01 100.0% 68.6%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 47.0 3.27e-01 97.5% 95.5%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.55 50.0 4.58e-01 100.0% 85.3%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 44.0 3.06e-01 86.1% 69.6%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 47.0 3.14e-01 100.0% 68.7%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.54 46.0 4.22e-01 93.7% 88.2%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 3.11e-01 84.8% 51.5%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 45.0 3.01e-01 94.9% 83.5%
3bdiA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 46.0 3.48e-01 100.0% 83.1%
2jobA00 3.30.160.320 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 44.0 4.12e-01 96.2% 82.4%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.53 43.0 3.45e-01 93.7% 85.3%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 46.0 3.20e-01 100.0% 87.3%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 44.0 4.19e-01 97.5% 79.8%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.20e-01 100.0% 82.8%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.73e-01 82.3% 68.7%
1celA00 2.70.100.10 Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain 0.52 43.0 2.72e-01 92.4% 94.5%
5h8iI00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.52 43.0 3.08e-01 100.0% 81.2%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 42.0 3.68e-01 87.3% 86.3%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 44.0 3.88e-01 96.2% 95.0%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 4.23e-01 89.9% 95.8%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.45e-01 84.8% 95.2%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.49e-01 96.2% 94.2%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 3.06e-01 100.0% 84.5%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 37.0 3.12e-01 81.0% 55.7%
2qh9A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.50 37.0 2.96e-01 82.3% 48.9%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3875809 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.74 66.0 5.20e-01 98.7% 73.3%
4952863 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.74 57.0 4.77e-01 82.3% 51.1%
3802306 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.74 52.0 4.89e-01 73.4% 86.3%
4990953 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.73 58.0 4.96e-01 84.8% 71.8%
4196609 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.72 57.0 4.95e-01 86.1% 75.8%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.72 52.0 4.69e-01 75.9% 87.6%
5009702 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.71 61.0 5.05e-01 93.7% 78.6%
4940099 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.71 54.0 3.45e-01 81.0% 32.9%
5051273 12.3.1.14 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.71 57.0 3.98e-01 87.3% 92.4%
5028909 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.70 53.0 3.25e-01 81.0% 26.1%
5028935 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 49.0 5.22e-01 74.7% 91.4%
4974962 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 52.0 3.43e-01 81.0% 41.2%
3433185 1094.1.1.0 a/b three-layered sandwiches › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain 0.69 55.0 4.09e-01 87.3% 68.3%
3592697 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 54.0 3.41e-01 84.8% 32.8%
5042381 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.68 51.0 3.31e-01 82.3% 33.1%
3169693 5.1.4.80 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.67 49.0 3.18e-01 77.2% 23.1%
5047049 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.67 52.0 3.06e-01 82.3% 21.2%
4929322 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.67 59.0 5.46e-01 96.2% 79.0%
3612982 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.67 56.0 4.53e-01 89.9% 81.2%
4997106 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.66 59.0 5.23e-01 100.0% 80.0%
3289437 881.1.1.15 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.66 51.0 4.29e-01 82.3% 56.2%
3386263 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 54.0 3.86e-01 89.9% 89.4%
3718996 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 52.0 3.20e-01 87.3% 34.0%
5018904 71.1.1.8 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.64 49.0 3.67e-01 81.0% 85.1%
3245132 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.64 52.0 4.42e-01 88.6% 90.8%
3435911 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.64 51.0 4.58e-01 96.2% 61.8%
5005890 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 48.0 3.73e-01 81.0% 89.1%
4026007 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 50.0 5.01e-01 93.7% 83.7%
3670595 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 52.0 4.95e-01 97.5% 75.8%
3969970 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.63 45.0 4.60e-01 74.7% 82.7%
3596303 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 52.0 5.31e-01 96.2% 94.7%
3507674 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.62 45.0 2.80e-01 77.2% 33.9%
3443636 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 49.0 3.20e-01 84.8% 30.7%
4464751 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.62 46.0 3.63e-01 79.7% 81.2%
3224154 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.62 45.0 2.97e-01 78.5% 25.5%
4234566 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.62 52.0 3.57e-01 93.7% 81.4%
3220069 5.1.4.147 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.61 44.0 2.82e-01 74.7% 28.4%
3809302 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 52.0 5.09e-01 97.5% 85.9%
3933565 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.61 51.0 3.23e-01 89.9% 92.6%
4984017 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.61 47.0 3.70e-01 82.3% 76.2%
3333293 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 48.0 4.89e-01 97.5% 89.3%
5041343 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 47.0 4.81e-01 82.3% 93.3%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 51.0 5.16e-01 94.9% 96.2%
3695223 5.1.4.515 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26607 0.60 46.0 2.99e-01 82.3% 36.2%
3959649 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 51.0 3.92e-01 97.5% 86.3%
4014366 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 43.0 2.84e-01 77.2% 32.2%
3715465 331.9.1.2 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.60 51.0 4.47e-01 96.2% 65.0%
3794471 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.60 43.0 2.83e-01 77.2% 29.3%
3587129 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 43.0 4.68e-01 78.5% 98.5%
3280401 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 43.0 4.65e-01 78.5% 96.9%
4344957 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.59 51.0 4.67e-01 96.2% 73.3%
3244141 5.1.4.320 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 0.59 45.0 2.92e-01 83.5% 30.3%
3904009 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.58 43.0 2.84e-01 79.7% 29.6%
3706310 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.58 51.0 4.71e-01 100.0% 88.6%
3810743 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 41.0 2.91e-01 74.7% 29.0%
5016167 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.58 47.0 3.68e-01 88.6% 77.1%
3591681 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.57 42.0 3.80e-01 78.5% 88.2%
4944765 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 49.0 3.05e-01 98.7% 26.0%
43384 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.56 41.0 2.78e-01 77.2% 27.6%
3772257 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 40.0 2.73e-01 77.2% 28.6%
4970384 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.55 38.0 3.77e-01 73.4% 89.4%
3644563 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.55 47.0 2.87e-01 97.5% 97.3%
5046744 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 40.0 3.69e-01 79.7% 89.5%
3694880 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.54 48.0 3.95e-01 100.0% 53.8%
4001894 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.53 41.0 2.34e-01 82.3% 36.1%
5053325 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.56e-01 79.7% 87.3%
4999855 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 38.0 3.46e-01 77.2% 86.4%
4420721 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.52 42.0 2.87e-01 93.7% 71.3%
4951490 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.52 38.0 3.64e-01 81.0% 92.0%
3720627 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 2.95e-01 100.0% 71.4%
4344873 2004.1.1.361 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UTP25_NTPase-like 0.51 38.0 2.53e-01 81.0% 84.9%
3859494 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.51 41.0 2.79e-01 97.5% 89.9%
D2 high residues 99-185
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 45.0 4.90e-01 87.4% 78.9%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 45.0 4.84e-01 87.4% 77.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.26e-01 98.9% 89.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 43.0 4.99e-01 78.2% 93.2%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 40.0 4.74e-01 74.7% 91.1%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 38.0 4.47e-01 81.6% 92.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.55e-01 73.6% 91.9%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 40.0 4.63e-01 82.8% 92.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.96e-01 88.5% 100.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 45.0 4.83e-01 83.9% 95.8%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.24e-01 89.7% 72.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.38e-01 100.0% 82.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 39.0 4.36e-01 70.1% 100.0%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 3.83e-01 79.3% 89.2%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 41.0 2.78e-01 83.9% 56.5%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 3.41e-01 75.9% 86.1%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 39.0 2.56e-01 82.8% 37.1%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 38.0 3.35e-01 78.2% 95.6%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 37.0 2.98e-01 74.7% 79.2%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 39.0 2.71e-01 83.9% 64.7%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 36.0 2.98e-01 90.8% 41.9%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 34.0 3.76e-01 90.8% 87.1%
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 39.0 2.72e-01 82.8% 29.9%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 39.0 2.72e-01 82.8% 30.4%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.28e-01 85.1% 89.9%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.51 39.0 3.55e-01 82.8% 84.7%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 35.0 3.02e-01 73.6% 79.2%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4071917 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.74 43.0 5.39e-01 80.5% 100.0%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 46.0 4.47e-01 78.2% 57.9%
5026824 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 48.0 5.28e-01 87.4% 85.7%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.71 42.0 5.16e-01 78.2% 94.5%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.71 46.0 4.61e-01 74.7% 64.4%
5034724 4.1.1.482 beta barrels › SH3 › SH3 › SH3 › DUF4314 0.71 44.0 5.34e-01 72.4% 100.0%
3255902 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 45.0 4.74e-01 86.2% 72.5%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 45.0 5.26e-01 78.2% 96.7%
3855972 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.69 44.0 4.89e-01 78.2% 86.2%
3305914 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.69 35.0 3.26e-01 94.3% 40.0%
3547093 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 48.0 4.79e-01 100.0% 74.4%
2553270 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 47.0 5.08e-01 80.5% 90.4%
3260945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 42.0 4.86e-01 70.1% 95.0%
3508319 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 42.0 4.77e-01 85.1% 89.2%
4407054 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.65 39.0 4.62e-01 82.8% 88.3%
1031172 4.1.1.113 beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.65 49.0 5.32e-01 89.7% 98.6%
5043533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 45.0 5.11e-01 87.4% 100.0%
5013328 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.64 41.0 4.78e-01 85.1% 93.3%
3910933 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.64 39.0 4.48e-01 81.6% 86.7%
3445382 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.64 31.0 4.27e-01 92.0% 100.0%
5048974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 4.76e-01 86.2% 68.2%
4114201 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.64 42.0 4.69e-01 85.1% 89.2%
3679362 4.1.1.351 beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.61 43.0 4.38e-01 73.6% 100.0%
3886492 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.61 45.0 4.82e-01 86.2% 90.7%
3328685 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.61 41.0 4.61e-01 80.5% 92.3%
3487453 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.60 48.0 4.29e-01 87.4% 90.4%
194928 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.59 49.0 4.24e-01 89.7% 72.4%
5037456 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.59 49.0 4.18e-01 92.0% 82.1%
4943011 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.58 48.0 4.74e-01 92.0% 93.7%
4034031 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.56 37.0 4.17e-01 72.4% 92.3%
5026836 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 32.0 3.47e-01 77.0% 68.6%
4957141 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 39.0 4.11e-01 75.9% 98.7%
3710893 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 43.0 3.82e-01 88.5% 63.8%
3363301 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.53 41.0 2.79e-01 82.8% 27.5%
3436240 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.53 41.0 2.80e-01 83.9% 28.0%
3927520 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.52 41.0 4.11e-01 83.9% 92.2%
3700528 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 37.0 3.33e-01 74.7% 72.8%
None 0.52 39.0 2.81e-01 79.3% 36.4%
3661025 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.52 41.0 3.81e-01 87.4% 95.7%
3816372 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.52 38.0 2.70e-01 78.2% 31.5%
3576958 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.51 39.0 3.05e-01 82.8% 45.1%
4023915 220.1.1.53 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.51 40.0 3.67e-01 85.1% 87.0%
3908140 5.1.3.135 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.51 39.0 2.65e-01 82.8% 26.3%
3896169 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 39.0 2.65e-01 82.8% 23.6%
3868838 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.50 43.0 3.58e-01 96.6% 75.0%
4096983 5.1.3.135 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.50 39.0 2.63e-01 82.8% 27.5%