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MN586027.1__QGJ93457.1__SEA_MUFASA8_7__00007

Bact-Vir

MN586027.1__QGJ93457.1__SEA_MUFASA8_7__00007

Identity

Accession:
MN586027 ↗
Kingdom:
phage

Quality

69.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mufasoctovirus› Arthrobacter_phage_Mufasa8

TaxID: 2656526

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-66
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e9xB01 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.69 59.0 5.31e-01 100.0% 71.2%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 55.0 4.34e-01 93.3% 83.2%
4yapA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 38.0 2.72e-01 93.3% 19.0%
1vw4F02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.67 54.0 4.53e-01 100.0% 87.0%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.66 51.0 4.60e-01 93.3% 98.6%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.65 50.0 4.33e-01 93.3% 88.9%
1l4dB00 3.10.20.180 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.64 47.0 3.56e-01 80.0% 57.1%
5fhiA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 36.0 3.00e-01 91.1% 30.3%
1pmtA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 36.0 2.84e-01 93.3% 25.5%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.14e-01 100.0% 72.2%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.61 49.0 4.24e-01 93.3% 80.0%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.59 45.0 3.87e-01 93.3% 87.1%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 45.0 4.05e-01 93.3% 98.6%
4f87B00 3.30.720.190 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.58 38.0 3.49e-01 100.0% 48.4%
2d0bA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.57 43.0 3.78e-01 100.0% 75.3%
2as9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 40.0 3.30e-01 80.0% 56.4%
1ds1A00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.56 41.0 2.54e-01 84.4% 34.7%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 43.0 3.72e-01 100.0% 98.9%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 38.0 2.91e-01 80.0% 46.0%
3nkdA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.54 41.0 3.48e-01 88.9% 89.3%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.53 33.0 2.58e-01 91.1% 26.3%
3ztvA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.53 39.0 2.35e-01 84.4% 87.7%
3iplB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.52 39.0 2.33e-01 82.2% 25.5%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.52 40.0 2.60e-01 88.9% 34.2%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.52 35.0 2.91e-01 73.3% 57.0%
3h5aD01 3.90.930.70 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 40.0 3.45e-01 97.8% 89.8%
1bwzA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 36.0 2.82e-01 84.4% 60.6%
2j8gA02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.51 34.0 2.95e-01 73.3% 63.4%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.51 38.0 3.23e-01 93.3% 59.1%
3nzkA01 3.30.230.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › lpxc deacetylase, domain 1 0.51 37.0 2.89e-01 91.1% 68.8%
3hiaA00 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.51 35.0 3.20e-01 73.3% 78.8%
1f7uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 40.0 2.42e-01 91.1% 31.4%
2v05A02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.50 35.0 2.45e-01 75.6% 30.8%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964573 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.86 72.0 7.32e-01 93.3% 95.5%
4979633 4076.3.1.8 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.74 64.0 5.69e-01 100.0% 72.3%
4509443 4076.3.1.8 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.71 60.0 5.35e-01 97.8% 70.8%
4566383 4076.3.1.8 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.70 58.0 5.26e-01 100.0% 72.3%
4304365 4076.3.1.8 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.69 58.0 5.10e-01 97.8% 65.7%
5024995 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.69 58.0 5.60e-01 100.0% 86.8%
5049679 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.68 58.0 5.38e-01 100.0% 78.3%
5069643 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.68 58.0 5.55e-01 100.0% 88.7%
4944185 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.67 56.0 5.09e-01 100.0% 70.8%
4447285 331.1.1.6 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.66 52.0 4.64e-01 93.3% 95.7%
2884367 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.66 51.0 4.34e-01 93.3% 86.9%
4169249 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.65 56.0 5.52e-01 100.0% 93.8%
4945853 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.65 50.0 4.34e-01 93.3% 92.5%
5031576 4076.3.1.8 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.65 52.0 4.97e-01 97.8% 81.8%
4235013 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.64 51.0 3.70e-01 93.3% 72.1%
5025566 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.64 53.0 5.09e-01 100.0% 92.7%
4269273 4076.4.1.1 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain › PriS_C 0.64 52.0 5.28e-01 95.6% 97.8%
4230268 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.62 50.0 5.00e-01 97.8% 97.8%
5036149 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.61 49.0 4.95e-01 100.0% 97.8%
3416069 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.60 47.0 4.26e-01 93.3% 90.0%
3308989 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.60 44.0 3.07e-01 84.4% 92.4%
3289942 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.10e-01 100.0% 95.3%
3545258 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.59 44.0 2.48e-01 91.1% 9.6%
3787709 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 35.0 3.67e-01 93.3% 60.0%
4946925 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 45.0 3.94e-01 91.1% 74.7%
4028983 898.1.1.1 ↗ a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 0.58 46.0 3.49e-01 100.0% 56.8%
4998266 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 43.0 3.96e-01 95.6% 97.1%
5013280 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 44.0 3.57e-01 91.1% 73.7%
1837127 331.1.1.6 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.56 43.0 3.75e-01 100.0% 75.3%
4077309 331.1.1.6 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.55 42.0 3.77e-01 100.0% 86.3%
5038842 3987.1.1.0 ↗ a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain 0.54 40.0 3.06e-01 84.4% 50.0%
4998989 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.54 41.0 2.73e-01 100.0% 82.2%
4989374 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 43.0 3.68e-01 97.8% 88.2%
4972029 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 39.0 2.78e-01 84.4% 90.6%
4031431 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.53 40.0 3.78e-01 93.3% 98.5%
3216286 5.1.3.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 0.53 35.0 2.37e-01 71.1% 36.4%
4344008 1.1.7.92 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_I 0.51 38.0 3.26e-01 93.3% 87.4%
3929201 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 33.0 3.32e-01 71.1% 61.2%
369186 702.1.1.9 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 0.51 35.0 3.00e-01 73.3% 62.7%
4206079 2002.5.1.1 ↗ a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.51 39.0 2.48e-01 82.2% 35.0%
4243025 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 38.0 2.46e-01 100.0% 40.2%
3198039 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.50 36.0 2.98e-01 80.0% 87.2%
D2 medium residues 76-133
PDB
Domain cluster: representative