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MN586027.1__QGJ93486.1__SEA_MUFASA8_37__00037

Bact-Vir

MN586027.1__QGJ93486.1__SEA_MUFASA8_37__00037

Identity

Accession:
MN586027 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72_128-140
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dteA01 1.10.10.2910 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 67.0 5.87e-01 84.3% 70.9%
1pwuA04 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.79 63.0 4.50e-01 84.3% 58.4%
1eb6A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.75 59.0 4.60e-01 84.3% 96.0%
4jiuA00 3.30.2010.10 Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" 0.74 61.0 5.66e-01 89.2% 94.3%
4jixB00 3.30.2010.10 Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" 0.73 58.0 5.38e-01 84.3% 73.1%
1xfxA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.69 54.0 3.94e-01 84.3% 67.5%
3lmcA00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.69 56.0 4.23e-01 86.7% 88.0%
2kptA00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.60 45.0 3.73e-01 80.7% 45.9%
1bapA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 45.0 3.68e-01 91.6% 85.0%
2cgeA03 1.20.120.790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Heat shock protein 90, C-terminal domain 0.55 43.0 3.57e-01 84.3% 73.2%
6jebA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.54 39.0 4.10e-01 92.8% 85.3%
2yz0A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 38.0 3.29e-01 74.7% 63.8%
4zi6C01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.54 41.0 3.33e-01 84.3% 66.3%
5k2xA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 37.0 2.44e-01 75.9% 53.4%
6y6hA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.50 39.0 3.12e-01 84.3% 81.6%
6whjD00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 37.0 2.58e-01 80.7% 26.1%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290645 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.89 72.0 6.21e-01 84.3% 63.3%
4951424 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.87 70.0 5.13e-01 84.3% 68.7%
4961903 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.87 71.0 5.79e-01 85.5% 67.9%
3589463 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.86 70.0 5.56e-01 85.5% 63.9%
3953982 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.85 68.0 4.93e-01 84.3% 41.4%
3286933 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.85 68.0 5.67e-01 84.3% 69.4%
3989086 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.85 68.0 5.05e-01 84.3% 40.5%
185182 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.83 67.0 5.83e-01 84.3% 69.7%
4159098 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.82 66.0 5.16e-01 84.3% 45.4%
3291444 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.82 65.0 5.28e-01 84.3% 77.3%
5060050 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.82 67.0 4.77e-01 86.7% 81.3%
3289507 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.82 65.0 5.39e-01 84.3% 78.6%
4033720 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.82 66.0 5.15e-01 84.3% 50.0%
4011118 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.81 67.0 4.55e-01 86.7% 64.4%
4537352 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.81 65.0 5.12e-01 84.3% 50.6%
3953551 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.81 65.0 4.79e-01 84.3% 36.0%
3936153 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.80 65.0 5.27e-01 86.7% 68.0%
5055672 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.80 64.0 5.90e-01 85.5% 84.8%
4416753 2498.1.1.59 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_U49 0.79 66.0 4.53e-01 89.2% 66.9%
4938622 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.79 64.0 4.74e-01 86.7% 75.6%
5054592 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.79 63.0 5.68e-01 84.3% 80.9%
3983196 2498.1.1.57 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › LPD1 0.77 61.0 4.31e-01 84.3% 61.3%
4960523 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.76 63.0 5.61e-01 88.0% 80.0%
4988454 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.76 62.0 5.78e-01 85.5% 85.0%
3596937 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.76 61.0 5.67e-01 84.3% 79.0%
3962296 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.76 60.0 4.29e-01 84.3% 36.5%
4950654 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.76 60.0 4.53e-01 84.3% 37.9%
3954373 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 59.0 4.02e-01 84.3% 28.5%
5077870 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.75 61.0 4.42e-01 86.7% 81.4%
None 0.75 59.0 4.22e-01 84.3% 36.1%
4967466 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.74 59.0 5.44e-01 84.3% 74.3%
5016438 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.74 59.0 4.79e-01 85.5% 48.4%
3838568 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.74 58.0 5.34e-01 84.3% 65.7%
3957469 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.73 58.0 4.74e-01 85.5% 54.7%
3386105 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.72 57.0 4.93e-01 85.5% 63.1%
4947544 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.71 57.0 4.69e-01 85.5% 56.6%
4954771 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.70 56.0 4.43e-01 86.7% 55.3%
4958679 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 56.0 4.30e-01 88.0% 64.6%
3457901 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.64 49.0 4.04e-01 84.3% 77.4%
5027975 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.63 48.0 4.68e-01 84.3% 92.6%
5061805 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.60 48.0 4.36e-01 85.5% 65.5%
3731646 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.60 47.0 3.96e-01 84.3% 80.7%
4115486 604.3.1.11 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.54 45.0 3.65e-01 92.8% 75.2%
5054144 7516.1.1.79 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 0.54 39.0 2.65e-01 75.9% 59.4%
4259645 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.54 42.0 3.43e-01 84.3% 66.5%
4189545 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.52 40.0 3.38e-01 84.3% 66.7%
D2 high residues 74-112
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 71.0 4.90e-01 94.9% 33.3%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.65e-01 97.4% 63.0%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 69.0 6.08e-01 100.0% 68.3%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 5.05e-01 94.9% 42.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.41e-01 100.0% 49.4%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 4.49e-01 94.9% 28.3%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.24e-01 100.0% 51.2%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.15e-01 100.0% 76.9%
1x1aA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 4.31e-01 100.0% 24.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.47e-01 100.0% 58.3%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.11e-01 100.0% 41.9%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 4.61e-01 100.0% 29.9%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.05e-01 100.0% 43.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 66.0 5.55e-01 100.0% 58.6%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 4.48e-01 100.0% 27.4%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.77 60.0 3.85e-01 87.2% 73.5%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 4.59e-01 100.0% 32.6%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.56e-01 100.0% 62.7%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 4.98e-01 100.0% 47.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.22e-01 94.9% 51.4%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.63e-01 100.0% 61.9%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.02e-01 100.0% 45.6%
3sdgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 60.0 5.94e-01 89.7% 97.6%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 4.69e-01 94.9% 41.7%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 64.0 5.62e-01 100.0% 75.4%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.13e-01 100.0% 53.1%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 4.42e-01 100.0% 29.9%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.42e-01 92.3% 62.1%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 66.0 5.89e-01 100.0% 69.6%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.75 64.0 4.04e-01 100.0% 21.0%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.56e-01 100.0% 68.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.53e-01 94.9% 66.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.05e-01 94.9% 49.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.52e-01 100.0% 61.9%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 4.11e-01 94.9% 29.1%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 4.30e-01 100.0% 27.9%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.74 62.0 4.09e-01 100.0% 30.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 4.75e-01 94.9% 42.5%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.18e-01 100.0% 26.5%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.82e-01 100.0% 50.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 63.0 5.66e-01 100.0% 89.1%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 60.0 4.51e-01 100.0% 41.1%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.73 62.0 4.57e-01 100.0% 50.9%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 59.0 3.87e-01 100.0% 30.6%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 62.0 5.59e-01 97.4% 72.2%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.72 60.0 4.11e-01 94.9% 27.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.99e-01 94.9% 58.7%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 61.0 3.83e-01 100.0% 44.6%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.63e-01 100.0% 48.3%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 5.42e-01 94.9% 91.7%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.71 62.0 4.34e-01 100.0% 38.4%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.10e-01 100.0% 36.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.66e-01 100.0% 86.7%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.21e-01 100.0% 91.4%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 60.0 4.56e-01 100.0% 47.9%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 56.0 3.65e-01 100.0% 26.2%
3htaC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 58.0 3.77e-01 100.0% 27.5%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 54.0 4.96e-01 100.0% 72.1%
3gziA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 57.0 3.69e-01 100.0% 25.6%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 59.0 3.78e-01 100.0% 53.2%
3qkxB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 57.0 3.73e-01 100.0% 28.2%
2d6yA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 56.0 3.70e-01 100.0% 27.4%
4jkzA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 56.0 3.73e-01 100.0% 29.6%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.67 55.0 4.23e-01 100.0% 42.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.67 55.0 5.07e-01 100.0% 71.4%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 5.33e-01 100.0% 88.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 53.0 4.09e-01 100.0% 44.7%
1rktA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 52.0 4.85e-01 94.9% 86.8%
6el2B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 54.0 5.14e-01 100.0% 95.9%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.66 54.0 3.71e-01 94.9% 36.1%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.66 52.0 3.60e-01 97.4% 54.2%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 52.0 4.16e-01 94.9% 43.7%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 53.0 4.05e-01 100.0% 42.5%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 4.93e-01 100.0% 97.6%
2vk9A04 1.10.274.80 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.63 51.0 3.84e-01 94.9% 58.7%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.62 51.0 3.81e-01 100.0% 45.5%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 43.0 3.81e-01 92.3% 88.1%
3f2bA08 1.10.150.870 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.57 43.0 3.16e-01 94.9% 29.9%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 75.0 6.11e-01 94.9% 52.9%
4961280 101.1.2.939 alpha arrays › HTH › HTH › winged helix domain › PF26270 0.85 74.0 6.20e-01 97.4% 58.5%
4927758 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 75.0 6.15e-01 100.0% 58.6%
4942421 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.84 69.0 4.93e-01 94.9% 38.3%
4010144 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.83 72.0 6.49e-01 100.0% 74.5%
4928175 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.83 73.0 7.16e-01 100.0% 92.9%
5079193 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 73.0 5.10e-01 100.0% 33.3%
4939633 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.82 72.0 6.11e-01 100.0% 61.9%
3288592 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 71.0 5.97e-01 100.0% 58.5%
4980926 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 71.0 5.18e-01 100.0% 40.0%
4064415 4187.1.1.0 a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like 0.82 67.0 4.57e-01 94.9% 30.7%
5007028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 70.0 6.26e-01 100.0% 69.1%
5027480 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 69.0 5.85e-01 100.0% 58.5%
5004061 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.81 70.0 6.00e-01 100.0% 60.9%
4968864 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 67.0 6.50e-01 97.4% 84.4%
5062774 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 4.60e-01 100.0% 23.6%
3711450 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.81 67.0 5.33e-01 94.9% 52.5%
4955811 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.80 69.0 5.33e-01 100.0% 46.7%
4933184 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 70.0 5.18e-01 100.0% 39.0%
4056597 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.80 68.0 4.02e-01 100.0% 15.0%
3967591 101.1.2.162 alpha arrays › HTH › HTH › winged helix domain › DprA_WH 0.79 64.0 5.48e-01 92.3% 55.4%
3969573 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 67.0 5.97e-01 100.0% 69.5%
3283527 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 66.0 5.24e-01 94.9% 46.3%
4391471 101.1.1.29 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.79 68.0 6.14e-01 100.0% 85.5%
5045218 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 4.98e-01 100.0% 41.0%
4929108 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.79 67.0 5.24e-01 100.0% 50.6%
4955713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 63.0 5.48e-01 94.9% 56.9%
4497103 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.79 67.0 4.94e-01 100.0% 41.9%
3711347 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.78 67.0 4.56e-01 100.0% 30.0%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.78 67.0 5.04e-01 94.9% 44.4%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.78 64.0 6.06e-01 100.0% 78.0%
3978422 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.78 66.0 5.97e-01 100.0% 78.2%
4954772 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 67.0 6.04e-01 100.0% 80.0%
4998031 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.78 67.0 4.35e-01 100.0% 22.5%
3303765 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.77 65.0 4.37e-01 100.0% 30.0%
4076621 101.1.1.29 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.77 67.0 6.24e-01 100.0% 94.0%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.77 66.0 5.27e-01 94.9% 53.3%
4965642 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 65.0 4.34e-01 100.0% 24.4%
3288981 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.77 62.0 4.93e-01 94.9% 55.3%
2686 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.76 64.0 5.02e-01 100.0% 45.6%
4121950 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 61.0 5.58e-01 94.9% 78.2%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 65.0 5.10e-01 94.9% 50.0%
4992527 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.76 64.0 5.06e-01 94.9% 50.0%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 66.0 6.09e-01 100.0% 80.0%
4323843 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 58.0 5.53e-01 92.3% 82.0%
4008367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.78e-01 100.0% 83.6%
3297365 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 62.0 4.05e-01 92.3% 25.4%
3926829 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 3.73e-01 100.0% 14.2%
4012714 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 4.26e-01 100.0% 28.7%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.74 63.0 5.70e-01 100.0% 72.7%
5044632 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.22e-01 94.9% 60.0%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.74 60.0 3.89e-01 94.9% 20.6%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.74 60.0 5.00e-01 97.4% 50.7%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.74 60.0 4.32e-01 100.0% 32.3%
3442744 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.52e-01 100.0% 72.7%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.74 65.0 5.23e-01 100.0% 57.3%
3589364 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 63.0 4.37e-01 100.0% 31.1%
3946233 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 5.53e-01 97.4% 76.4%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 62.0 5.01e-01 97.4% 53.3%
3974067 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 5.87e-01 100.0% 97.8%
3946840 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.73 56.0 5.51e-01 92.3% 93.3%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.73 61.0 6.08e-01 97.4% 100.0%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.73 62.0 5.06e-01 100.0% 52.0%
3944639 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 60.0 4.51e-01 97.4% 40.4%
3253586 101.1.10.9 alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.73 64.0 4.29e-01 100.0% 65.5%
3954888 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.72 60.0 5.22e-01 100.0% 100.0%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.72 64.0 4.50e-01 100.0% 35.8%
3987671 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 58.0 5.36e-01 100.0% 85.5%
3707741 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.06e-01 100.0% 56.9%
3290890 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.72 60.0 4.89e-01 100.0% 65.0%
3953810 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 57.0 4.85e-01 100.0% 74.7%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.71 61.0 4.92e-01 97.4% 56.0%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.45e-01 100.0% 76.4%
3952838 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 58.0 4.75e-01 100.0% 67.5%
5061082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 6.03e-01 100.0% 100.0%
3285523 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.23e-01 100.0% 83.3%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.70 58.0 5.87e-01 97.4% 100.0%
3960556 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 56.0 4.68e-01 100.0% 67.5%
3632861 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.74e-01 100.0% 86.7%
3330762 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.70 61.0 4.36e-01 100.0% 40.0%
3964284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 4.95e-01 97.4% 70.0%
3283788 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.69 56.0 4.71e-01 100.0% 69.3%
4944102 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 58.0 4.53e-01 100.0% 50.0%
4999627 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 57.0 3.99e-01 100.0% 33.3%
4629121 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.67 55.0 5.23e-01 100.0% 94.0%
4994316 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 55.0 3.87e-01 100.0% 32.1%
5053418 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 56.0 4.37e-01 100.0% 50.0%
5076381 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 55.0 4.20e-01 100.0% 45.0%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 51.0 5.11e-01 92.3% 95.0%
4929479 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 53.0 4.21e-01 100.0% 50.0%
2756315 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.63 51.0 3.85e-01 100.0% 39.3%