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MN586027.1__QGJ93519.1__SEA_MUFASA8_71__00071

Bact-Vir

MN586027.1__QGJ93519.1__SEA_MUFASA8_71__00071

Identity

Accession:
MN586027 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mufasoctovirus› Arthrobacter_phage_Mufasa8

TaxID: 2656526

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-81
PDB
Domain cluster: rep: MN703411.1__QGZ17171.1__SEA_DRYANG_72__00072__D11-56
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a62A01 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.63 47.0 5.01e-01 98.2% 100.0%
1jb0F00 1.10.8.110 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF 0.63 45.0 3.54e-01 80.7% 32.6%
1c00A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 51.0 3.06e-01 100.0% 42.4%
3p0hB02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 54.0 3.38e-01 100.0% 44.6%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.59 40.0 3.83e-01 91.2% 61.5%
2lc3A00 1.10.720.80 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.56 47.0 4.17e-01 98.2% 75.0%
7dd0C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 39.0 2.62e-01 73.7% 19.0%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 41.0 3.96e-01 80.7% 91.0%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.53 42.0 3.84e-01 86.0% 81.6%
5gz8A00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 45.0 2.93e-01 96.5% 73.2%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.52 37.0 3.41e-01 75.4% 66.7%
2liuA01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.52 44.0 3.92e-01 98.2% 96.5%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.51 43.0 3.95e-01 94.7% 88.2%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.25e-01 98.2% 73.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3788953 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.71 54.0 4.73e-01 86.0% 85.6%
3636947 101.1.3.9 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.67 37.0 3.93e-01 87.7% 62.0%
3677894 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.67 48.0 4.44e-01 78.9% 58.7%
5001435 103.5.1.0 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.67 52.0 5.03e-01 87.7% 83.1%
4431704 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.59 47.0 4.41e-01 89.5% 85.7%
3702243 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.58 44.0 4.50e-01 91.2% 90.9%
3505931 6130.1.1.0 ↗ alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain 0.54 40.0 3.85e-01 86.0% 78.6%
D2 high residues 87-135
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pgsA03 1.10.3410.10 Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain 0.71 57.0 4.51e-01 93.9% 44.3%
4e40A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.68 59.0 3.78e-01 98.0% 78.0%
7bqiA01 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.68 53.0 3.66e-01 87.8% 27.2%
4ywoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 55.0 3.60e-01 93.9% 35.4%
3hyuA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 50.0 3.55e-01 85.7% 28.4%
4ertA01 1.10.490.160 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.64 53.0 3.81e-01 100.0% 82.2%
4i8oA03 1.10.8.1130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain 0.64 42.0 3.83e-01 91.8% 49.3%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.61 54.0 4.44e-01 100.0% 83.1%
1e7lA02 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.60 36.0 3.53e-01 75.5% 50.9%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.60 49.0 3.51e-01 91.8% 31.3%
2cruA01 1.10.8.140 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain 0.58 50.0 4.34e-01 100.0% 63.6%
1zd9A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.03e-01 95.9% 82.5%
3qvmB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.59e-01 91.8% 43.9%
4yerA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 45.0 2.95e-01 100.0% 44.3%
5lo9A01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.51 37.0 3.18e-01 81.6% 51.2%
1dxlA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.50 37.0 2.89e-01 83.7% 79.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839266 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.68 59.0 3.83e-01 100.0% 71.2%
3197484 2007.2.3.13 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Rit1_C 0.67 59.0 3.72e-01 100.0% 76.8%
5067434 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.66 48.0 3.44e-01 100.0% 25.2%
4990316 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.66 48.0 4.55e-01 85.7% 65.0%
4031147 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.62 48.0 4.52e-01 85.7% 98.3%
3220045 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.62 50.0 3.78e-01 93.9% 35.4%
3399062 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 56.0 4.58e-01 100.0% 61.2%
3685770 2004.1.1.366 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.61 51.0 3.41e-01 93.9% 85.1%
3992442 592.7.1.1 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.53 43.0 3.65e-01 89.8% 85.9%
3616847 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.50e-01 79.6% 60.0%