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MN586029.1__QGJ93699.1__SEA_HANNACONDA_58__00058

Bact-Vir

MN586029.1__QGJ93699.1__SEA_HANNACONDA_58__00058

Identity

Accession:
MN586029 ↗
Kingdom:
phage

Quality

63.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Omegavirus› Mycobacterium_phage_Hannaconda

TaxID: 2656580

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-57
PDB
D2 high residues 97-155
PDB
Domain cluster: rep: KT206225.1__ALA48182.1__X__00069__D2-57
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.74 61.0 5.29e-01 96.6% 72.2%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 56.0 3.58e-01 81.4% 21.6%
4upiA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.73 61.0 3.58e-01 94.9% 16.2%
2g7jA00 3.90.1150.40 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 0.71 56.0 4.56e-01 86.4% 83.9%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.71 50.0 3.91e-01 74.6% 42.5%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.70 53.0 3.55e-01 83.1% 88.9%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.70 58.0 5.00e-01 94.9% 62.9%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.68 49.0 4.18e-01 76.3% 50.5%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.68 58.0 4.97e-01 100.0% 67.7%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 52.0 3.83e-01 88.1% 42.3%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 46.0 3.66e-01 74.6% 51.2%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.65 52.0 4.54e-01 88.1% 61.8%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 52.0 3.93e-01 93.2% 79.7%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.63 48.0 4.31e-01 83.1% 68.3%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 53.0 3.58e-01 96.6% 80.7%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.61 47.0 4.06e-01 84.7% 56.2%
4r7rA00 3.30.1490.410 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 0.61 54.0 4.29e-01 100.0% 85.2%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.46e-01 96.6% 60.6%
4ntqA00 3.10.380.20 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain 0.61 45.0 4.21e-01 81.4% 81.6%
3fhlA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 43.0 3.11e-01 78.0% 75.0%
4my0A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 49.0 3.75e-01 93.2% 65.0%
4abyD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 3.22e-01 100.0% 82.3%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.58 46.0 3.15e-01 93.2% 73.1%
3ei3B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.89e-01 89.8% 42.7%
2fl4A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 41.0 3.54e-01 83.1% 51.9%
4guzA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.55 45.0 3.27e-01 94.9% 68.0%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 3.21e-01 100.0% 42.9%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.54 46.0 3.23e-01 96.6% 94.4%
3l2pA03 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.53 38.0 3.14e-01 79.7% 98.3%
1yprA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 42.0 3.54e-01 100.0% 92.0%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 2.97e-01 94.9% 44.3%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.51 46.0 3.06e-01 100.0% 68.7%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.51 45.0 3.08e-01 100.0% 61.4%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.00e-01 100.0% 44.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931300 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.70 57.0 4.91e-01 88.1% 84.4%
3619455 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.69 56.0 4.81e-01 89.8% 100.0%
3241852 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.69 57.0 4.54e-01 89.8% 88.7%
None — 0.69 48.0 3.22e-01 74.6% 58.3%
5001237 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 4.24e-01 81.4% 85.7%
3268245 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.68 55.0 4.63e-01 89.8% 78.0%
3975292 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.66 56.0 3.43e-01 96.6% 15.6%
4475261 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.65 56.0 5.04e-01 98.3% 87.1%
4531960 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.64 54.0 3.47e-01 98.3% 19.6%
4982613 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 51.0 4.98e-01 89.8% 83.1%
2413833 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.62 53.0 4.16e-01 96.6% 71.1%
3692276 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.62 46.0 3.16e-01 83.1% 82.2%
4007983 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.61 42.0 3.64e-01 72.9% 73.7%
4005479 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 47.0 2.75e-01 86.4% 35.6%
3228083 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 49.0 3.28e-01 93.2% 35.8%
4995145 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.61 47.0 4.18e-01 84.7% 63.5%
3962822 331.3.1.2 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.59 50.0 3.88e-01 96.6% 88.1%
3445390 305.2.1.0 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.59 46.0 3.69e-01 84.7% 68.7%
4887950 7515.1.1.5 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C 0.59 43.0 2.60e-01 79.7% 93.3%
3226791 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.57 46.0 3.80e-01 98.3% 92.0%
3254948 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 46.0 3.22e-01 96.6% 69.8%
3987919 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.56 48.0 3.98e-01 100.0% 71.8%
3439828 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 44.0 2.87e-01 96.6% 91.2%
3647550 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.55 44.0 3.95e-01 91.5% 71.8%
4984268 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.54 42.0 3.61e-01 88.1% 90.0%
6880 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.53 42.0 3.54e-01 100.0% 92.0%