←Back to structures
MN586029.1__QGJ93831.1__SEA_HANNACONDA_192__00190
Bact-VirMN586029.1__QGJ93831.1__SEA_HANNACONDA_192__00190
Identity
- Accession:
- MN586029 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 2656580
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-72_135-151
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k6lG00 | 3.90.210.10 | Alpha Beta › Alpha-Beta Complex › Heat-Labile Enterotoxin; Chain A › Heat-Labile Enterotoxin, subunit A | 0.64 | 54.0 | 4.06e-01 | 94.4% | 58.0% |
D2
medium
residues 73-134
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 4.02e-01 | 100.0% | 78.0% |
| 3fijC00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 45.0 | 3.18e-01 | 100.0% | 44.8% |
| 4f9zA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 45.0 | 3.85e-01 | 96.8% | 80.6% |
| 3da8B00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.53 | 45.0 | 3.22e-01 | 100.0% | 68.8% |
| 2yvqA00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.52 | 42.0 | 3.49e-01 | 100.0% | 76.9% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 3.10e-01 | 100.0% | 69.7% |
| 4jc8A01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.52 | 43.0 | 3.48e-01 | 100.0% | 77.2% |
| 4nesA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 43.0 | 3.31e-01 | 100.0% | 42.3% |
| 2ffiA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 44.0 | 2.93e-01 | 100.0% | 35.2% |
| 3h0lA00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.51 | 42.0 | 2.60e-01 | 100.0% | 40.8% |
| 4b4dA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 40.0 | 3.11e-01 | 95.2% | 80.9% |
| 1w4rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.42e-01 | 100.0% | 75.8% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 38.0 | 3.45e-01 | 100.0% | 56.6% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.50 | 41.0 | 3.28e-01 | 98.4% | 76.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3364368 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.56 | 46.0 | 4.15e-01 | 96.8% | 67.8% |
| 4025922 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 44.0 | 3.14e-01 | 100.0% | 59.1% |
| 3535081 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.52 | 44.0 | 3.51e-01 | 100.0% | 62.1% |
| 3600970 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.52 | 43.0 | 3.42e-01 | 100.0% | 94.5% |
| 4960557 | 7523.1.1.27 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_2 | 0.51 | 41.0 | 2.93e-01 | 91.9% | 70.8% |
| 4927986 | 206.1.3.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF1297 | 0.51 | 42.0 | 2.72e-01 | 100.0% | 30.7% |