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MN586033.1__QGJ94146.1__SEA_EMIROSE_14__00013
Bact-VirMN586033.1__QGJ94146.1__SEA_EMIROSE_14__00013
Identity
- Accession:
- MN586033 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Taxonomy
TaxID: 2565372
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 99-168
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.69 | 41.0 | 3.59e-01 | 70.0% | 38.3% |
| 6al9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.68 | 46.0 | 4.22e-01 | 71.4% | 53.8% |
| 1a0aA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.67 | 48.0 | 5.08e-01 | 90.0% | 85.7% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 42.0 | 3.87e-01 | 70.0% | 51.1% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 51.0 | 4.33e-01 | 85.7% | 88.1% |
| 3eupB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 45.0 | 3.24e-01 | 77.1% | 30.0% |
| 3u5nA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.61 | 48.0 | 4.06e-01 | 85.7% | 66.7% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.61 | 46.0 | 4.30e-01 | 80.0% | 86.0% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.60 | 44.0 | 4.38e-01 | 78.6% | 97.2% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 44.0 | 3.49e-01 | 81.4% | 52.7% |
| 2yviA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 41.0 | 3.84e-01 | 78.6% | 58.4% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.58 | 41.0 | 3.83e-01 | 78.6% | 59.8% |
| 1y8aA02 | 1.10.3870.10 | Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily | 0.58 | 39.0 | 3.41e-01 | 71.4% | 61.2% |
| 6me6B02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 47.0 | 3.22e-01 | 94.3% | 42.1% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 39.0 | 3.47e-01 | 70.0% | 50.5% |
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.57 | 45.0 | 3.59e-01 | 88.6% | 76.2% |
| 2fm8C01 | 1.10.4150.10 | Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like | 0.56 | 45.0 | 3.33e-01 | 91.4% | 89.9% |
| 2xbkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 45.0 | 2.86e-01 | 92.9% | 49.1% |
| 3ungC04 | 1.20.120.1260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-Cas system, Cmr2 subunit, D4 domain, six-helix bundle | 0.55 | 42.0 | 3.77e-01 | 81.4% | 69.1% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 45.0 | 3.82e-01 | 88.6% | 84.8% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.54 | 37.0 | 3.48e-01 | 71.4% | 97.8% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 46.0 | 3.83e-01 | 95.7% | 98.4% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 38.0 | 3.72e-01 | 75.7% | 79.2% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 41.0 | 3.65e-01 | 87.1% | 95.1% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 40.0 | 3.69e-01 | 90.0% | 79.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4617209 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.70 | 51.0 | 3.43e-01 | 78.6% | 20.8% |
| 3719948 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.69 | 42.0 | 4.45e-01 | 88.6% | 67.7% |
| 3989094 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 41.0 | 4.11e-01 | 80.0% | 60.0% |
| 3232923 | 3291.1.1.221 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Nnf1 | 0.67 | 46.0 | 3.55e-01 | 74.3% | 32.3% |
| 3267277 | 632.3.1.24 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF4419 | 0.67 | 46.0 | 4.95e-01 | 71.4% | 96.4% |
| 3296414 | 192.29.1.168 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 | 0.66 | 39.0 | 4.00e-01 | 82.9% | 61.4% |
| 4547686 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.66 | 51.0 | 5.15e-01 | 84.3% | 98.6% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.65 | 46.0 | 3.11e-01 | 74.3% | 38.7% |
| 4333013 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.62 | 43.0 | 4.11e-01 | 72.9% | 62.5% |
| 3614529 | 109.4.1.301 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hid1 | 0.61 | 50.0 | 3.11e-01 | 87.1% | 35.3% |
| 3684006 | 148.1.3.205 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 | 0.61 | 47.0 | 4.52e-01 | 82.9% | 75.0% |
| 3870842 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 43.0 | 3.09e-01 | 80.0% | 34.1% |
| 3789184 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 49.0 | 4.07e-01 | 95.7% | 67.7% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.56 | 42.0 | 3.73e-01 | 80.0% | 57.9% |
| 3382465 | 192.29.1.48 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Chloroplast_duf | 0.56 | 44.0 | 3.51e-01 | 87.1% | 75.9% |