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MN586033.1__QGJ94149.1__SEA_EMIROSE_17__00017
Bact-VirMN586033.1__QGJ94149.1__SEA_EMIROSE_17__00017
Identity
- Accession:
- MN586033 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
TaxID: 2565372
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-106
Domain cluster:
rep: pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00028__D17-130
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.79 | 59.0 | 6.59e-01 | 89.2% | 100.0% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 34.0 | 4.29e-01 | 77.5% | 66.7% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 67.0 | 6.69e-01 | 100.0% | 92.5% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.68 | 62.0 | 5.30e-01 | 100.0% | 79.0% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.66 | 60.0 | 4.70e-01 | 100.0% | 65.1% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 56.0 | 5.56e-01 | 94.1% | 96.3% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.65 | 59.0 | 4.76e-01 | 100.0% | 70.8% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 42.0 | 4.21e-01 | 84.3% | 64.1% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.65 | 55.0 | 4.73e-01 | 93.1% | 80.4% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 55.0 | 5.07e-01 | 91.2% | 83.6% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 45.0 | 4.68e-01 | 76.5% | 78.5% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 54.0 | 4.97e-01 | 93.1% | 78.5% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 50.0 | 5.08e-01 | 89.2% | 84.8% |
| 3dmbA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 53.0 | 4.72e-01 | 91.2% | 72.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 49.0 | 4.67e-01 | 91.2% | 68.9% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 52.0 | 4.63e-01 | 92.2% | 61.9% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 57.0 | 4.52e-01 | 100.0% | 65.9% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 53.0 | 4.75e-01 | 91.2% | 72.7% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 57.0 | 5.06e-01 | 100.0% | 91.2% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 39.0 | 4.10e-01 | 73.5% | 69.2% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 53.0 | 4.65e-01 | 94.1% | 81.0% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.62 | 55.0 | 4.80e-01 | 99.0% | 83.7% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 55.0 | 5.09e-01 | 98.0% | 84.8% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.62 | 55.0 | 4.40e-01 | 98.0% | 85.3% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 55.0 | 4.90e-01 | 97.1% | 78.2% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.62 | 53.0 | 4.52e-01 | 97.1% | 96.0% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 54.0 | 4.56e-01 | 98.0% | 73.1% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 52.0 | 4.69e-01 | 93.1% | 74.3% |
| 1qa7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 48.0 | 4.78e-01 | 100.0% | 81.8% |
| 5jcvA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.60 | 52.0 | 4.39e-01 | 96.1% | 95.4% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 4.70e-01 | 91.2% | 80.2% |
| 3ba3B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 52.0 | 4.65e-01 | 97.1% | 81.8% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 37.0 | 3.88e-01 | 73.5% | 71.1% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.69e-01 | 97.1% | 83.6% |
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.57 | 32.0 | 3.43e-01 | 73.5% | 61.8% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 33.0 | 3.63e-01 | 73.5% | 73.1% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 46.0 | 4.17e-01 | 90.2% | 85.8% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 37.0 | 3.94e-01 | 78.4% | 77.5% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 40.0 | 3.78e-01 | 92.2% | 62.3% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.55 | 45.0 | 4.16e-01 | 90.2% | 87.5% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 34.0 | 3.83e-01 | 85.3% | 80.5% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.55 | 49.0 | 3.90e-01 | 99.0% | 80.5% |
| 6iw2A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.55 | 40.0 | 3.69e-01 | 76.5% | 95.5% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.55 | 44.0 | 4.16e-01 | 89.2% | 96.1% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 33.0 | 3.72e-01 | 72.5% | 79.7% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.87e-01 | 91.2% | 74.0% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 38.0 | 3.52e-01 | 77.5% | 88.4% |
| 5af7B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 40.0 | 3.90e-01 | 86.3% | 88.6% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 43.0 | 2.92e-01 | 98.0% | 46.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.81 | 64.0 | 7.01e-01 | 87.3% | 100.0% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.80 | 65.0 | 6.87e-01 | 91.2% | 96.7% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.78 | 64.0 | 6.79e-01 | 90.2% | 95.7% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 64.0 | 6.67e-01 | 87.3% | 100.0% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.76 | 71.0 | 6.92e-01 | 100.0% | 94.6% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 56.0 | 5.06e-01 | 79.4% | 96.4% |
| 4059301 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.73 | 62.0 | 6.07e-01 | 91.2% | 97.3% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.73 | 62.0 | 5.70e-01 | 90.2% | 73.1% |
| 3968432 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.73 | 55.0 | 5.52e-01 | 100.0% | 77.1% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 62.0 | 6.47e-01 | 100.0% | 98.9% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 63.0 | 6.28e-01 | 94.1% | 100.0% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 61.0 | 5.91e-01 | 92.2% | 95.7% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.72 | 59.0 | 6.24e-01 | 93.1% | 100.0% |
| 4014778 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.71 | 61.0 | 4.58e-01 | 91.2% | 65.5% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 56.0 | 6.07e-01 | 89.2% | 100.0% |
| 1117606 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.71 | 61.0 | 5.56e-01 | 94.1% | 97.8% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.70 | 63.0 | 6.21e-01 | 98.0% | 99.1% |
| 3744357 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.70 | 43.0 | 4.63e-01 | 74.5% | 72.9% |
| 3587074 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.70 | 60.0 | 5.87e-01 | 93.1% | 94.5% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 52.0 | 4.82e-01 | 79.4% | 76.0% |
| 3317802 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.67 | 40.0 | 4.21e-01 | 72.5% | 64.2% |
| 4349207 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 56.0 | 4.95e-01 | 100.0% | 62.4% |
| 3837954 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.67 | 46.0 | 4.80e-01 | 79.4% | 76.8% |
| 4646862 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.66 | 51.0 | 4.99e-01 | 91.2% | 75.5% |
| 1842342 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.66 | 60.0 | 4.70e-01 | 100.0% | 65.1% |
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.66 | 50.0 | 5.24e-01 | 91.2% | 90.0% |
| 5081326 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.66 | 36.0 | 4.39e-01 | 77.5% | 84.6% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.65 | 52.0 | 4.31e-01 | 100.0% | 48.3% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.65 | 51.0 | 3.79e-01 | 82.4% | 35.2% |
| 4409502 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.65 | 50.0 | 4.96e-01 | 92.2% | 77.3% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.64 | 48.0 | 4.74e-01 | 93.1% | 74.5% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.64 | 54.0 | 5.21e-01 | 92.2% | 97.4% |
| 4398032 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.64 | 49.0 | 4.77e-01 | 92.2% | 73.0% |
| 2832652 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.64 | 56.0 | 4.58e-01 | 98.0% | 93.2% |
| 3265698 | 1.1.13.66 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dicty_CAD | 0.64 | 50.0 | 5.19e-01 | 87.3% | 91.6% |
| 428579 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.64 | 55.0 | 4.96e-01 | 94.1% | 90.5% |
| 164720 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 52.0 | 4.63e-01 | 92.2% | 61.9% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 57.0 | 5.06e-01 | 100.0% | 91.2% |
| 4586448 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.63 | 55.0 | 4.62e-01 | 98.0% | 74.7% |
| 1566317 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.62 | 55.0 | 4.80e-01 | 99.0% | 83.7% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.62 | 52.0 | 4.15e-01 | 100.0% | 44.2% |
| 64 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.61 | 54.0 | 4.85e-01 | 97.1% | 78.7% |
| 4931996 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.61 | 54.0 | 5.00e-01 | 99.0% | 79.7% |
| 331530 | 1.1.5.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx_2 | 0.61 | 52.0 | 4.63e-01 | 93.1% | 78.5% |
| 4928817 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.60 | 52.0 | 4.60e-01 | 97.1% | 81.3% |
| 5020258 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 50.0 | 4.79e-01 | 93.1% | 84.2% |
| 4030911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 36.0 | 3.89e-01 | 76.5% | 77.4% |
| 3789510 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 36.0 | 3.87e-01 | 78.4% | 77.6% |
| 3716955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 32.0 | 3.69e-01 | 80.4% | 84.3% |
| 3174446 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 43.0 | 2.92e-01 | 90.2% | 25.6% |
D2
high
residues 111-221
Domain cluster:
rep: KF692088.2__AHB31628.1__ArV2_gp17__00017__D97-194
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.73 | 52.0 | 5.65e-01 | 100.0% | 89.1% |
| 1wruA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.71 | 53.0 | 5.88e-01 | 100.0% | 97.7% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.70 | 46.0 | 5.39e-01 | 91.9% | 97.4% |
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.69 | 51.0 | 5.53e-01 | 100.0% | 94.6% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.68 | 53.0 | 5.64e-01 | 100.0% | 94.8% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.67 | 54.0 | 5.65e-01 | 99.1% | 97.0% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 30.0 | 3.48e-01 | 76.6% | 77.0% |
| 3oc9A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 41.0 | 2.88e-01 | 84.7% | 87.0% |
| 6blkC00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 42.0 | 3.80e-01 | 91.9% | 84.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.78 | 50.0 | 5.99e-01 | 98.2% | 97.3% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.72 | 47.0 | 5.51e-01 | 97.3% | 98.7% |
| 3967020 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.71 | 47.0 | 5.27e-01 | 97.3% | 88.2% |
| 3970829 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.70 | 52.0 | 5.74e-01 | 100.0% | 96.7% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.68 | 52.0 | 5.64e-01 | 100.0% | 97.8% |
| 4988104 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.68 | 51.0 | 5.62e-01 | 100.0% | 96.7% |
| 3943692 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.68 | 53.0 | 5.68e-01 | 100.0% | 96.8% |
| 3948421 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.68 | 47.0 | 5.25e-01 | 100.0% | 94.1% |
| 3967349 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.67 | 45.0 | 5.00e-01 | 98.2% | 89.4% |
| 3967438 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.65 | 48.0 | 5.18e-01 | 100.0% | 95.6% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.64 | 48.0 | 5.15e-01 | 100.0% | 97.8% |
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.64 | 48.0 | 5.15e-01 | 100.0% | 97.8% |
| 3511355 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.63 | 57.0 | 5.72e-01 | 100.0% | 98.3% |
| 3974451 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.61 | 40.0 | 4.35e-01 | 95.5% | 84.7% |
| 4602558 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.60 | 37.0 | 3.60e-01 | 100.0% | 56.7% |
| 5026569 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 34.0 | 3.38e-01 | 95.5% | 61.7% |
| 5004889 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.51 | 41.0 | 3.14e-01 | 87.4% | 88.3% |
| 3218262 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.50 | 39.0 | 2.78e-01 | 82.9% | 70.7% |
D3
high
residues 223-242_323-387
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.71 | 62.0 | 4.87e-01 | 100.0% | 46.9% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.68 | 61.0 | 4.82e-01 | 100.0% | 48.9% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.67 | 60.0 | 5.84e-01 | 100.0% | 93.7% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 54.0 | 5.23e-01 | 96.5% | 78.5% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 47.0 | 4.61e-01 | 100.0% | 69.6% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 54.0 | 5.05e-01 | 97.6% | 73.3% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.62 | 48.0 | 4.23e-01 | 83.5% | 91.1% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 4.43e-01 | 96.5% | 74.1% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.61 | 53.0 | 4.74e-01 | 100.0% | 72.0% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 45.0 | 3.96e-01 | 78.8% | 88.9% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.60 | 46.0 | 4.12e-01 | 83.5% | 91.1% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.60 | 52.0 | 4.33e-01 | 98.8% | 73.7% |
| 1feuA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 52.0 | 5.10e-01 | 98.8% | 97.8% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 50.0 | 5.00e-01 | 94.1% | 97.7% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.59 | 46.0 | 4.19e-01 | 100.0% | 62.1% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.26e-01 | 88.2% | 75.6% |
| 4hizA01 | 3.30.750.60 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Endosialidase, N-terminal extension domain | 0.59 | 27.0 | 3.51e-01 | 78.8% | 83.3% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.58 | 47.0 | 4.39e-01 | 96.5% | 70.5% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 49.0 | 4.36e-01 | 94.1% | 65.6% |
| 3ju4A01 | 3.30.750.60 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Endosialidase, N-terminal extension domain | 0.57 | 28.0 | 2.98e-01 | 80.0% | 50.0% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 35.0 | 3.42e-01 | 82.4% | 54.2% |
| 8a8gA01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.56 | 49.0 | 4.21e-01 | 98.8% | 89.3% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.55 | 45.0 | 4.04e-01 | 91.8% | 92.9% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 35.0 | 3.44e-01 | 83.5% | 58.2% |
| 2gjwC01 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 32.0 | 2.74e-01 | 81.2% | 33.6% |
| 1r0vA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 33.0 | 3.43e-01 | 84.7% | 63.6% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 38.0 | 3.66e-01 | 87.1% | 63.0% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.54 | 45.0 | 3.42e-01 | 90.6% | 79.2% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 46.0 | 3.51e-01 | 97.6% | 81.5% |
| 4o4bB00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.53 | 37.0 | 2.72e-01 | 92.9% | 25.2% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 42.0 | 2.88e-01 | 91.8% | 23.5% |
| 4qdjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 3.31e-01 | 90.6% | 41.8% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 44.0 | 4.31e-01 | 91.8% | 83.7% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 41.0 | 3.95e-01 | 87.1% | 86.3% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.53 | 43.0 | 3.30e-01 | 90.6% | 82.8% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.52 | 38.0 | 3.25e-01 | 77.6% | 58.3% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.52 | 42.0 | 3.24e-01 | 90.6% | 80.8% |
| 6j7cA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 40.0 | 3.30e-01 | 97.6% | 44.8% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.51 | 36.0 | 3.11e-01 | 74.1% | 60.9% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.50 | 42.0 | 3.95e-01 | 94.1% | 76.4% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 42.0 | 3.36e-01 | 90.6% | 49.7% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 41.0 | 3.93e-01 | 91.8% | 78.4% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 56.0 | 5.43e-01 | 96.5% | 68.4% |
| 3970513 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.75 | 55.0 | 5.53e-01 | 96.5% | 76.5% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 53.0 | 5.91e-01 | 84.7% | 96.9% |
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 58.0 | 6.09e-01 | 100.0% | 97.3% |
| 3590379 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 67.0 | 6.59e-01 | 100.0% | 94.4% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.18e-01 | 100.0% | 95.0% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.72 | 58.0 | 5.93e-01 | 100.0% | 92.5% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.71 | 56.0 | 5.78e-01 | 98.8% | 88.9% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.71 | 56.0 | 4.98e-01 | 96.5% | 60.0% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 60.0 | 6.02e-01 | 100.0% | 94.1% |
| 3059161 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.69 | 56.0 | 5.72e-01 | 100.0% | 91.5% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 6.12e-01 | 100.0% | 97.6% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.68 | 56.0 | 5.62e-01 | 88.2% | 95.3% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 61.0 | 5.69e-01 | 100.0% | 92.4% |
| 5067380 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 59.0 | 5.03e-01 | 98.8% | 81.4% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 60.0 | 5.75e-01 | 98.8% | 92.8% |
| 3654292 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.66 | 60.0 | 4.29e-01 | 100.0% | 62.6% |
| 3639132 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 59.0 | 4.74e-01 | 98.8% | 66.7% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.66 | 56.0 | 5.57e-01 | 100.0% | 88.9% |
| 4031101 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 58.0 | 5.01e-01 | 98.8% | 63.1% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 59.0 | 5.53e-01 | 98.8% | 93.1% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.65 | 58.0 | 5.24e-01 | 98.8% | 91.3% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 45.0 | 4.89e-01 | 72.9% | 90.0% |
| 3974369 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 53.0 | 5.33e-01 | 100.0% | 90.6% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 57.0 | 4.88e-01 | 97.6% | 63.2% |
| 4024673 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.64 | 45.0 | 4.16e-01 | 74.1% | 98.2% |
| 4030042 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.64 | 47.0 | 4.08e-01 | 77.6% | 94.7% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.64 | 54.0 | 5.29e-01 | 100.0% | 87.0% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 54.0 | 4.82e-01 | 92.9% | 68.3% |
| 4052507 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.63 | 55.0 | 5.35e-01 | 96.5% | 96.8% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 56.0 | 5.36e-01 | 100.0% | 91.0% |
| 4638008 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.63 | 47.0 | 4.16e-01 | 77.6% | 95.8% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 54.0 | 4.74e-01 | 96.5% | 64.0% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.63 | 54.0 | 5.03e-01 | 95.3% | 96.2% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 56.0 | 5.34e-01 | 100.0% | 86.0% |
| 4668753 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.62 | 55.0 | 5.21e-01 | 98.8% | 95.0% |
| 4482805 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.62 | 54.0 | 4.15e-01 | 96.5% | 62.6% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.62 | 55.0 | 4.90e-01 | 100.0% | 89.5% |
| 3253514 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.62 | 56.0 | 5.30e-01 | 100.0% | 97.0% |
| 4231034 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.62 | 55.0 | 5.21e-01 | 98.8% | 93.0% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.62 | 54.0 | 4.03e-01 | 98.8% | 38.6% |
| 4285300 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.62 | 55.0 | 5.30e-01 | 98.8% | 98.9% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 53.0 | 4.71e-01 | 96.5% | 75.2% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 53.0 | 4.88e-01 | 96.5% | 83.6% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 53.0 | 5.27e-01 | 98.8% | 92.2% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 53.0 | 4.67e-01 | 98.8% | 65.6% |
| 4031205 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 54.0 | 4.12e-01 | 98.8% | 63.1% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.61 | 53.0 | 5.27e-01 | 98.8% | 93.3% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.60 | 51.0 | 5.05e-01 | 98.8% | 88.9% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.60 | 53.0 | 4.61e-01 | 97.6% | 64.6% |
| 4259249 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.60 | 52.0 | 5.07e-01 | 98.8% | 97.9% |
| 4493865 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.60 | 52.0 | 4.93e-01 | 96.5% | 95.0% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.59 | 51.0 | 5.18e-01 | 96.5% | 96.5% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.59 | 52.0 | 4.96e-01 | 98.8% | 93.0% |
| 4681723 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.59 | 52.0 | 5.04e-01 | 98.8% | 96.8% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.59 | 52.0 | 5.05e-01 | 98.8% | 88.4% |
| 2770396 | 1.1.13.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CoV_NSP9 | 0.59 | 47.0 | 4.11e-01 | 96.5% | 58.3% |
| 4391792 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.58 | 44.0 | 4.26e-01 | 97.6% | 72.6% |
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 50.0 | 4.98e-01 | 98.8% | 93.3% |
| 4524276 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.57 | 44.0 | 2.98e-01 | 83.5% | 66.0% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.56 | 48.0 | 4.73e-01 | 98.8% | 91.1% |
| 4465190 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.56 | 43.0 | 2.91e-01 | 83.5% | 63.8% |
| 3516834 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 49.0 | 3.38e-01 | 100.0% | 80.3% |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 45.0 | 3.30e-01 | 94.1% | 34.5% |
| 3457166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 31.0 | 3.78e-01 | 100.0% | 98.0% |
| 4475204 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 44.0 | 3.13e-01 | 92.9% | 57.3% |
| None | — | 0.52 | 43.0 | 3.12e-01 | 91.8% | 57.4% | |
| 3517262 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 40.0 | 3.17e-01 | 83.5% | 46.3% |
| 4266150 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 43.0 | 3.09e-01 | 92.9% | 55.7% |
| 4569317 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 41.0 | 3.04e-01 | 91.8% | 54.5% |
| 4337358 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 42.0 | 3.03e-01 | 91.8% | 54.3% |
| 4194681 | 2003.1.5.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TrmK | 0.51 | 42.0 | 3.46e-01 | 90.6% | 51.6% |
| 3608810 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.99e-01 | 88.2% | 81.1% |
| 4985721 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 42.0 | 2.98e-01 | 91.8% | 44.8% |
| 4645759 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.50 | 40.0 | 3.19e-01 | 100.0% | 39.5% |
| 4304256 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.50 | 42.0 | 3.07e-01 | 92.9% | 57.8% |
| 4958221 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.50 | 40.0 | 2.83e-01 | 87.1% | 33.1% |
| 4022776 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.50 | 42.0 | 2.72e-01 | 98.8% | 83.9% |
D4
high
residues 250-320
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qejD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.69 | 44.0 | 3.72e-01 | 90.1% | 39.0% |
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.68 | 48.0 | 5.18e-01 | 100.0% | 88.3% |
| 1k28D04 | 3.30.1920.40 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.66 | 45.0 | 4.74e-01 | 93.0% | 79.7% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.64 | 38.0 | 2.96e-01 | 88.7% | 27.3% |
| 4cgxA00 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.61 | 38.0 | 2.93e-01 | 85.9% | 28.0% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 38.0 | 3.54e-01 | 87.3% | 47.9% |
| 1zxhA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 34.0 | 3.75e-01 | 90.1% | 69.6% |
| 2fazA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 32.0 | 3.11e-01 | 87.3% | 45.5% |
| 1x1mA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 39.0 | 3.41e-01 | 91.5% | 44.9% |
| 6k9nA01 | 3.30.200.60 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Peptidase C65 Otubain, subdomain 1 | 0.57 | 35.0 | 3.23e-01 | 88.7% | 47.8% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 35.0 | 3.13e-01 | 90.1% | 40.2% |
| 4qarA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.56 | 48.0 | 3.60e-01 | 100.0% | 97.9% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 37.0 | 3.38e-01 | 91.5% | 49.0% |
| 3k85A00 | 3.30.230.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 48.0 | 3.20e-01 | 97.2% | 84.6% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 48.0 | 4.51e-01 | 100.0% | 82.6% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 45.0 | 2.99e-01 | 94.4% | 79.9% |
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.53 | 45.0 | 3.39e-01 | 100.0% | 50.5% |
| 4rhaA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.52 | 43.0 | 3.68e-01 | 100.0% | 60.3% |
| 3h4xA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 43.0 | 2.91e-01 | 97.2% | 98.1% |
| 3lq9A00 | 3.90.470.40 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › RTP801-like | 0.51 | 40.0 | 3.39e-01 | 90.1% | 74.2% |
| 2ka6B00 | 6.10.250.3310 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › signal transducer and activator of transcription 1 | 0.50 | 20.0 | 2.52e-01 | 81.7% | 55.6% |
| 1oeyL00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 31.0 | 2.88e-01 | 94.4% | 43.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4049733 | 3071.1.1.8 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › YQBQ | 0.81 | 60.0 | 6.24e-01 | 100.0% | 84.6% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 57.0 | 5.76e-01 | 100.0% | 87.1% |
| 4034618 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 59.0 | 5.96e-01 | 100.0% | 91.4% |
| 3980575 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.67 | 54.0 | 5.46e-01 | 97.2% | 91.4% |
| 3591075 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 36.0 | 3.44e-01 | 87.3% | 44.7% |
| 4341425 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.61 | 50.0 | 3.42e-01 | 93.0% | 28.3% |
| 3487190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 40.0 | 3.64e-01 | 71.8% | 97.9% |
| 3701346 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 37.0 | 3.49e-01 | 88.7% | 54.1% |
| 3915318 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.56 | 46.0 | 3.03e-01 | 98.6% | 78.2% |
| 3243038 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.54 | 47.0 | 3.05e-01 | 100.0% | 45.1% |
| 3556134 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.53 | 38.0 | 3.26e-01 | 74.6% | 81.8% |
| None | — | 0.53 | 46.0 | 3.11e-01 | 100.0% | 49.3% | |
| 4012020 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 43.0 | 2.96e-01 | 98.6% | 83.2% |
| 3212396 | 221.1.1.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX | 0.51 | 29.0 | 2.84e-01 | 94.4% | 46.3% |