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MN592896.1__QGZ13108.1__X__00012
Bact-VirMN592896.1__QGZ13108.1__X__00012
Identity
- Accession:
- MN592896 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-65
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ox3A00 | 1.20.5.320 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 | 0.77 | 52.0 | 4.33e-01 | 87.7% | 41.7% |
| 5awwY00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.76 | 54.0 | 3.27e-01 | 75.4% | 13.4% |
| 2o8bA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.76 | 58.0 | 5.39e-01 | 83.1% | 96.4% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.72 | 50.0 | 3.59e-01 | 73.8% | 42.0% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.70 | 54.0 | 4.32e-01 | 86.2% | 54.4% |
| 2douB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 48.0 | 3.74e-01 | 78.5% | 63.8% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 43.0 | 3.33e-01 | 72.3% | 65.1% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.61 | 41.0 | 4.16e-01 | 70.8% | 89.2% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.60 | 42.0 | 3.59e-01 | 73.8% | 98.2% |
| 1bu8A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 39.0 | 2.47e-01 | 72.3% | 17.4% |
| 5yuyA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 41.0 | 3.38e-01 | 76.9% | 73.8% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 36.0 | 2.75e-01 | 73.8% | 47.7% |
| 1n8jA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 37.0 | 2.80e-01 | 81.5% | 76.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012108 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 70.0 | 4.45e-01 | 100.0% | 24.6% |
| 3238018 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.77 | 60.0 | 3.80e-01 | 83.1% | 24.4% |
| 4972215 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 65.0 | 4.34e-01 | 89.2% | 29.0% |
| 184678 | 6041.1.1.1 ↗ | a+b two layers › DUF1107-like › DUF1107-like › DUF1107-like › DUF1107 | 0.75 | 33.0 | 3.20e-01 | 72.3% | 36.5% |
| 3970671 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.75 | 57.0 | 5.43e-01 | 84.6% | 69.3% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 60.0 | 4.41e-01 | 100.0% | 34.7% |
| 4187983 | 314.1.1.12 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat | 0.72 | 53.0 | 3.71e-01 | 78.5% | 43.9% |
| 5031480 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.69 | 49.0 | 3.25e-01 | 75.4% | 36.5% |
| 3381691 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.66 | 50.0 | 3.29e-01 | 86.2% | 25.3% |
| 3306543 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.63 | 43.0 | 4.19e-01 | 70.8% | 87.1% |
| 5011998 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.58 | 40.0 | 2.57e-01 | 72.3% | 16.6% |
| 3822981 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.58 | 42.0 | 2.66e-01 | 76.9% | 65.3% |
| 3403644 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.57 | 43.0 | 2.82e-01 | 78.5% | 55.7% |
| 3997581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 36.0 | 2.34e-01 | 72.3% | 32.2% |
| 5022019 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 36.0 | 3.39e-01 | 70.8% | 65.0% |
| 4030787 | 605.1.1.303 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 | 0.53 | 44.0 | 3.83e-01 | 90.8% | 70.0% |
| 3612606 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.51 | 41.0 | 3.56e-01 | 95.4% | 63.6% |