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MN592896.1__QGZ13152.1__X__00056
Bact-VirMN592896.1__QGZ13152.1__X__00056
Identity
- Accession:
- MN592896 ↗
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-49
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.64 | 53.0 | 4.43e-01 | 97.9% | 88.6% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.64 | 52.0 | 4.55e-01 | 97.9% | 94.9% |
| 6hlyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 47.0 | 3.19e-01 | 87.2% | 36.3% |
| 2ztgA05 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.61 | 41.0 | 3.98e-01 | 70.2% | 72.7% |
| 4b8cD02 | 3.30.1370.190 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 46.0 | 4.27e-01 | 93.6% | 67.6% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 3.77e-01 | 100.0% | 53.5% |
| 1uc8A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 37.0 | 3.51e-01 | 97.9% | 52.6% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 46.0 | 3.80e-01 | 97.9% | 72.8% |
| 4paaA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 38.0 | 2.62e-01 | 70.2% | 33.5% |
| 3zlaD01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.54 | 47.0 | 3.48e-01 | 100.0% | 38.1% |
| 1cfrA00 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.54 | 41.0 | 2.62e-01 | 89.4% | 30.7% |
| 3n5lA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 40.0 | 3.06e-01 | 91.5% | 40.4% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.53 | 47.0 | 3.43e-01 | 100.0% | 37.8% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 45.0 | 3.37e-01 | 100.0% | 51.6% |
| 1v72A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 36.0 | 3.00e-01 | 78.7% | 61.4% |
| 6uioC01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 42.0 | 3.38e-01 | 100.0% | 51.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016488 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 47.0 | 4.39e-01 | 70.2% | 78.3% |
| 5051554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.08e-01 | 100.0% | 91.3% |
| 3260870 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.68 | 57.0 | 4.72e-01 | 100.0% | 66.7% |
| 3595328 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 56.0 | 4.45e-01 | 100.0% | 59.0% |
| 4991879 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 4.37e-01 | 100.0% | 73.3% |
| 3745560 | 244.1.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO | 0.63 | 38.0 | 2.64e-01 | 85.1% | 18.1% |
| 4991791 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 4.22e-01 | 100.0% | 75.8% |
| 4990919 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 4.14e-01 | 100.0% | 76.0% |
| 3930044 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 4.38e-01 | 100.0% | 98.8% |
| 3475579 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.62 | 50.0 | 4.12e-01 | 100.0% | 60.0% |
| 5026168 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 47.0 | 3.35e-01 | 87.2% | 33.5% |
| 3561231 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.60 | 43.0 | 2.43e-01 | 80.9% | 64.2% |
| 4413861 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.57 | 48.0 | 3.41e-01 | 97.9% | 67.1% |
| 4997247 | 101.1.2.137 ↗ | alpha arrays › HTH › HTH › winged helix domain › OST-HTH | 0.57 | 45.0 | 4.07e-01 | 97.9% | 100.0% |
| 3666424 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 3.57e-01 | 100.0% | 62.5% |
| 3710770 | 141.1.1.25 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › DGF-1_C | 0.56 | 44.0 | 2.69e-01 | 87.2% | 40.0% |
| 3485346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 3.86e-01 | 91.5% | 74.7% |
| 4002063 | 109.4.1.1593 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.56 | 40.0 | 2.19e-01 | 80.9% | 8.7% |
| None | — | 0.56 | 38.0 | 2.49e-01 | 70.2% | 15.0% | |
| 3879981 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.55 | 46.0 | 4.23e-01 | 100.0% | 92.3% |
| 4993303 | 7523.1.1.11 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth | 0.55 | 43.0 | 2.96e-01 | 89.4% | 26.9% |
| 3198801 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 47.0 | 3.22e-01 | 97.9% | 32.1% |
| 4252455 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.55e-01 | 100.0% | 88.4% |
| None | — | 0.54 | 41.0 | 2.45e-01 | 85.1% | 50.5% | |
| 4978764 | 304.131.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phosphonoacetate hydrolase insertion domain › Phosphonoacetate hydrolase insertion domain | 0.53 | 42.0 | 3.46e-01 | 93.6% | 55.8% |
| 9227 | 2003.1.2.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 | 0.53 | 43.0 | 2.80e-01 | 91.5% | 39.0% |
| 4037889 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 39.0 | 2.84e-01 | 85.1% | 48.0% |
| 3409254 | 101.1.2.393 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_MCM2 | 0.53 | 43.0 | 3.77e-01 | 100.0% | 90.0% |
| 3281430 | 7523.1.1.25 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd | 0.52 | 40.0 | 2.91e-01 | 95.7% | 33.7% |
| 3992233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.42e-01 | 97.9% | 75.0% |
| 3734563 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.43e-01 | 100.0% | 34.0% |
| 3486417 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.93e-01 | 100.0% | 90.0% |
| 3620179 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 39.0 | 2.63e-01 | 100.0% | 99.6% |