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MN617773.1__QGH71317.1__X1_57__00057

Bact-Vir

MN617773.1__QGH71317.1__X1_57__00057

Identity

Accession:
MN617773 ↗
Kingdom:
phage

Quality

51.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yersinia_phage_vB_Yen_X1

TaxID: 2663327

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-64
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.61 52.0 4.31e-01 100.0% 54.7%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 31.0 3.54e-01 94.7% 76.9%
5e75A00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 38.0 2.29e-01 89.5% 13.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033826 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 48.0 4.22e-01 100.0% 74.7%
3208203 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.56 34.0 3.50e-01 75.4% 61.8%
5061081 375.1.1.83 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB 0.52 31.0 3.30e-01 84.2% 68.0%
5060491 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.52 33.0 2.65e-01 94.7% 31.7%
4060639 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.50 41.0 2.57e-01 100.0% 32.7%
D2 high residues 73-149
PDB
D3 medium residues 171-255
PDB