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MN648445.1__QGT55347.1__X__00190

Bact-Vir

MN648445.1__QGT55347.1__X__00190

Identity

Accession:
MN648445 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yfoA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.79 55.0 4.41e-01 73.1% 87.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.78 67.0 5.55e-01 94.2% 55.1%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.78 62.0 5.11e-01 100.0% 50.0%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.76 63.0 4.46e-01 100.0% 31.3%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.74 65.0 4.88e-01 100.0% 50.0%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.73 62.0 4.72e-01 98.1% 42.2%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.73 62.0 4.93e-01 94.2% 49.0%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.71 59.0 5.61e-01 94.2% 79.4%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.70 57.0 4.08e-01 98.1% 29.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 54.0 4.69e-01 96.2% 56.8%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.68 55.0 5.29e-01 96.2% 81.7%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.67 44.0 3.39e-01 76.9% 28.1%
2cn2A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 59.0 3.51e-01 100.0% 28.4%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 51.0 4.19e-01 90.4% 45.0%
2qg7B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 52.0 4.21e-01 98.1% 45.5%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 54.0 4.33e-01 98.1% 47.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 51.0 3.78e-01 90.4% 36.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 49.0 3.59e-01 86.5% 29.2%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 54.0 3.99e-01 96.2% 38.1%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 3.89e-01 96.2% 38.6%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 4.30e-01 92.3% 65.2%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 48.0 4.42e-01 98.1% 65.8%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 3.92e-01 98.1% 44.6%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 48.0 3.75e-01 94.2% 68.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 3.90e-01 86.5% 74.7%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.54 43.0 3.68e-01 98.1% 54.5%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 41.0 3.50e-01 94.2% 50.0%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3199763 220.1.1.202 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.81 66.0 4.92e-01 94.2% 36.8%
3279448 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.79 68.0 5.06e-01 98.1% 42.1%
None 0.77 66.0 3.78e-01 94.2% 10.4%
4355722 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.76 67.0 5.50e-01 100.0% 61.1%
4015630 3257.1.1.0 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.76 65.0 4.24e-01 96.2% 22.9%
3177251 216.1.1.41 a+b two layers › UBC-like › UBC-like › UBC-like › PF29959 0.75 64.0 4.57e-01 96.2% 68.4%
3242315 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.73 62.0 6.11e-01 100.0% 87.3%
3272267 5.1.4.166 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.73 62.0 3.66e-01 96.2% 19.8%
3505993 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 62.0 3.75e-01 98.1% 15.9%
3802207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.72 63.0 3.87e-01 100.0% 17.1%
3683807 708.1.1.2 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.71 59.0 4.90e-01 94.2% 52.6%
5054163 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 60.0 4.73e-01 96.2% 70.0%
4945458 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 61.0 4.96e-01 98.1% 60.2%
4890891 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.70 62.0 4.48e-01 100.0% 40.3%
3927770 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 57.0 4.14e-01 94.2% 49.3%
3917645 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 4.34e-01 94.2% 42.5%
3935996 59.1.1.9 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF 0.68 59.0 4.73e-01 100.0% 67.6%
3633627 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 57.0 4.16e-01 100.0% 34.5%
3947082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 56.0 4.76e-01 98.1% 56.7%
3735233 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.66 58.0 3.45e-01 100.0% 31.1%
4030584 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.65 57.0 3.43e-01 100.0% 20.0%
3419526 5.1.5.146 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like 0.65 55.0 3.36e-01 98.1% 23.5%
4929282 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 56.0 4.98e-01 98.1% 74.7%
3698170 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.64 55.0 3.31e-01 98.1% 22.6%
3639845 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.64 51.0 4.08e-01 94.2% 42.7%
3500942 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.64 55.0 4.28e-01 94.2% 47.3%
3736971 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.64 56.0 3.34e-01 100.0% 23.6%
3481722 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.63 50.0 4.06e-01 90.4% 48.6%
3194962 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 50.0 3.11e-01 92.3% 77.6%
4545039 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 46.0 4.34e-01 96.2% 75.7%
3263715 59.1.2.2 beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › Ydr279_N 0.50 42.0 3.74e-01 100.0% 76.2%
D2 medium residues 53-112
PDB