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MN688132.1__QHR63323.1__X__00015
Bact-VirMN688132.1__QHR63323.1__X__00015
Identity
- Accession:
- MN688132 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdnA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.63 | 43.0 | 3.10e-01 | 71.7% | 57.4% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 48.0 | 4.29e-01 | 86.8% | 62.0% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 49.0 | 3.64e-01 | 100.0% | 56.7% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.58 | 40.0 | 3.19e-01 | 75.5% | 34.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 37.0 | 3.66e-01 | 86.8% | 59.6% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 47.0 | 3.31e-01 | 96.2% | 96.6% |
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.56 | 38.0 | 2.59e-01 | 71.7% | 22.4% |
| 4pifA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.56 | 40.0 | 2.98e-01 | 75.5% | 42.4% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.56 | 39.0 | 2.81e-01 | 71.7% | 24.5% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 37.0 | 3.48e-01 | 86.8% | 52.9% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 48.0 | 3.37e-01 | 100.0% | 70.2% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 39.0 | 2.87e-01 | 77.4% | 25.3% |
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.54 | 44.0 | 2.78e-01 | 94.3% | 21.4% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.24e-01 | 100.0% | 67.4% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.53 | 44.0 | 2.67e-01 | 100.0% | 40.2% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 36.0 | 2.95e-01 | 75.5% | 59.6% |
| 3mcbB00 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.51 | 38.0 | 3.73e-01 | 81.1% | 79.3% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.51 | 35.0 | 2.72e-01 | 71.7% | 52.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3913384 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.78 | 56.0 | 3.32e-01 | 77.4% | 11.8% |
| 3873734 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.76 | 55.0 | 3.27e-01 | 77.4% | 12.0% |
| 3802860 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.71 | 51.0 | 3.14e-01 | 77.4% | 14.2% |
| 5000655 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 52.0 | 3.79e-01 | 86.8% | 48.4% |
| 4883800 | 244.1.1.12 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Smoa_sbd | 0.63 | 50.0 | 3.55e-01 | 86.8% | 50.0% |
| 3412592 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.63 | 45.0 | 2.81e-01 | 77.4% | 21.9% |
| 3508960 | 5.1.3.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_HCF, Beta-prop_ATRN-LZTR1 | 0.62 | 50.0 | 3.05e-01 | 92.5% | 14.1% |
| 3232370 | 5.1.3.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 | 0.60 | 48.0 | 2.95e-01 | 92.5% | 13.6% |
| 3611326 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 50.0 | 2.92e-01 | 100.0% | 41.7% |
| 3936858 | 11.12.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb | 0.59 | 50.0 | 2.99e-01 | 100.0% | 37.3% |
| 3939706 | 11.1.1.798 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_1st | 0.59 | 41.0 | 2.95e-01 | 75.5% | 90.0% |
| 5029914 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.58 | 41.0 | 4.08e-01 | 75.5% | 74.5% |
| 4994359 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.57 | 36.0 | 3.77e-01 | 75.5% | 68.0% |
| 3600004 | 10.37.1.0 ↗ | beta sandwiches › jelly-roll › TerD › TerD | 0.56 | 45.0 | 3.26e-01 | 92.5% | 51.8% |
| 3706357 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.56 | 43.0 | 2.83e-01 | 84.9% | 26.2% |
| 4506576 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.54 | 43.0 | 2.80e-01 | 100.0% | 40.0% |
| 3585734 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.53 | 36.0 | 2.74e-01 | 71.7% | 30.7% |
| 5034331 | 74.1.1.0 ↗ | beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain | 0.53 | 38.0 | 3.91e-01 | 77.4% | 88.0% |
| 4029951 | 220.1.1.310 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29397, PF29398 | 0.53 | 46.0 | 3.37e-01 | 100.0% | 48.3% |
| 4167790 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.52 | 33.0 | 3.26e-01 | 77.4% | 56.7% |
| 3858714 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.52 | 38.0 | 3.72e-01 | 81.1% | 76.7% |
| 3404903 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 36.0 | 2.54e-01 | 77.4% | 82.6% |
| 3587596 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 37.0 | 2.69e-01 | 83.0% | 84.6% |