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MN689528.1__QGT53494.1__CHPC972_001159__00016
Bact-VirMN689528.1__QGT53494.1__CHPC972_001159__00016
Identity
- Accession:
- MN689528 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
TaxID: 2675260
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-58
Domain cluster:
rep: MW900438.1__QVJ07716.1__S1R3Y_000007__00007__D3-56
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.75 | 55.0 | 3.31e-01 | 79.6% | 63.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.72 | 56.0 | 5.25e-01 | 85.2% | 69.7% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.71 | 59.0 | 5.45e-01 | 100.0% | 72.2% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.71 | 51.0 | 3.99e-01 | 77.8% | 62.2% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.70 | 46.0 | 4.60e-01 | 87.0% | 64.9% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.70 | 57.0 | 3.73e-01 | 92.6% | 26.7% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.68 | 53.0 | 4.40e-01 | 85.2% | 57.3% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 58.0 | 4.20e-01 | 100.0% | 94.0% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.68 | 59.0 | 4.34e-01 | 100.0% | 48.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.68 | 55.0 | 4.82e-01 | 90.7% | 89.0% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.67 | 51.0 | 4.16e-01 | 85.2% | 47.7% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.67 | 49.0 | 4.27e-01 | 100.0% | 50.0% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.67 | 50.0 | 5.16e-01 | 85.2% | 92.0% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.66 | 50.0 | 4.32e-01 | 85.2% | 67.4% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.66 | 55.0 | 4.78e-01 | 100.0% | 95.7% |
| 5eh1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 57.0 | 4.76e-01 | 100.0% | 61.1% |
| 3gd0A01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.65 | 56.0 | 3.65e-01 | 100.0% | 40.0% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.65 | 56.0 | 4.39e-01 | 100.0% | 79.2% |
| 2iciA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 54.0 | 4.01e-01 | 98.1% | 57.7% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.63 | 55.0 | 4.11e-01 | 100.0% | 55.6% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.63 | 54.0 | 4.22e-01 | 100.0% | 58.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 48.0 | 4.04e-01 | 85.2% | 61.2% |
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.63 | 56.0 | 4.50e-01 | 100.0% | 74.0% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 4.32e-01 | 100.0% | 58.9% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 47.0 | 4.29e-01 | 85.2% | 72.4% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 46.0 | 3.88e-01 | 88.9% | 46.3% |
| 3ar4A04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.62 | 45.0 | 2.95e-01 | 79.6% | 96.3% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 50.0 | 4.38e-01 | 100.0% | 72.3% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 50.0 | 3.74e-01 | 90.7% | 94.9% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 47.0 | 3.40e-01 | 85.2% | 55.1% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 45.0 | 3.86e-01 | 85.2% | 49.0% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.59 | 44.0 | 3.89e-01 | 88.9% | 55.1% |
| 8evkA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.59 | 50.0 | 4.11e-01 | 100.0% | 74.1% |
| 4bpuC00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.59 | 49.0 | 3.03e-01 | 100.0% | 73.8% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.58 | 47.0 | 4.39e-01 | 100.0% | 75.0% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 44.0 | 3.83e-01 | 87.0% | 87.0% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 48.0 | 4.29e-01 | 100.0% | 94.0% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.57 | 44.0 | 4.30e-01 | 100.0% | 78.7% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 46.0 | 3.38e-01 | 90.7% | 94.9% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.57 | 40.0 | 3.09e-01 | 83.3% | 31.5% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 47.0 | 4.31e-01 | 100.0% | 96.2% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 43.0 | 3.33e-01 | 88.9% | 92.1% |
| 4lrjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 47.0 | 4.25e-01 | 92.6% | 71.2% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.56e-01 | 96.3% | 97.8% |
| 7tn8A01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 39.0 | 2.73e-01 | 74.1% | 33.9% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.18e-01 | 75.9% | 91.8% |
| 6eo5B01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 46.0 | 3.07e-01 | 98.1% | 90.6% |
| 3ddjA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 45.0 | 3.54e-01 | 98.1% | 58.1% |
| 4nlcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 38.0 | 2.55e-01 | 75.9% | 59.5% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 43.0 | 4.13e-01 | 100.0% | 77.6% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.54 | 41.0 | 4.02e-01 | 85.2% | 88.7% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.54 | 45.0 | 3.42e-01 | 100.0% | 82.9% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 40.0 | 3.38e-01 | 85.2% | 59.6% |
| 2wyqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 45.0 | 4.12e-01 | 100.0% | 93.5% |
| 4iwxA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 44.0 | 3.61e-01 | 100.0% | 68.5% |
| 2q7dA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 45.0 | 3.13e-01 | 100.0% | 49.0% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.52 | 40.0 | 3.71e-01 | 90.7% | 72.7% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 3.76e-01 | 92.6% | 88.7% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 2.84e-01 | 74.1% | 49.2% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 46.0 | 3.26e-01 | 100.0% | 38.7% |
| 1e0yA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 37.0 | 3.01e-01 | 81.5% | 45.9% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 40.0 | 3.37e-01 | 100.0% | 68.8% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3686690 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.80 | 70.0 | 6.03e-01 | 100.0% | 97.6% |
| 3723377 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.79 | 69.0 | 5.27e-01 | 100.0% | 66.4% |
| 4632256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 59.0 | 5.28e-01 | 81.5% | 94.7% |
| 3200703 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.77 | 67.0 | 5.82e-01 | 100.0% | 96.5% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.76 | 59.0 | 5.39e-01 | 87.0% | 98.7% |
| 3590658 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 58.0 | 5.29e-01 | 85.2% | 94.3% |
| 4623707 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.73 | 57.0 | 4.76e-01 | 87.0% | 87.4% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.72 | 58.0 | 4.88e-01 | 88.9% | 87.8% |
| 5040024 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 64.0 | 5.03e-01 | 100.0% | 60.9% |
| 4961379 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.71 | 56.0 | 3.72e-01 | 88.9% | 21.4% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.70 | 57.0 | 3.46e-01 | 92.6% | 43.9% |
| 3630069 | 223.1.1.101 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 | 0.70 | 51.0 | 2.90e-01 | 79.6% | 61.6% |
| 5009755 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.69 | 56.0 | 3.74e-01 | 90.7% | 23.3% |
| 3958896 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.68 | 50.0 | 4.87e-01 | 79.6% | 75.0% |
| 3607227 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.67 | 48.0 | 4.97e-01 | 77.8% | 96.0% |
| 3508713 | 382.1.1.25 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › YjeJ | 0.66 | 54.0 | 4.18e-01 | 90.7% | 67.5% |
| 3972526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 57.0 | 5.19e-01 | 94.4% | 92.9% |
| 4271892 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 50.0 | 3.87e-01 | 85.2% | 54.4% |
| 5045395 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.65 | 55.0 | 4.47e-01 | 100.0% | 96.3% |
| 3789849 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 56.0 | 5.43e-01 | 100.0% | 91.7% |
| 5046788 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 58.0 | 4.45e-01 | 100.0% | 45.0% |
| 3829044 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.64 | 46.0 | 2.88e-01 | 75.9% | 19.7% |
| 3282305 | 4187.1.1.0 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like | 0.63 | 53.0 | 4.93e-01 | 98.1% | 75.7% |
| 3704667 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.63 | 51.0 | 3.15e-01 | 92.6% | 47.8% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.62 | 44.0 | 4.73e-01 | 81.5% | 93.3% |
| 3289401 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 51.0 | 4.04e-01 | 100.0% | 50.0% |
| 4443054 | 3115.1.1.9 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › YjeJ | 0.62 | 48.0 | 3.87e-01 | 90.7% | 67.5% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.62 | 45.0 | 4.59e-01 | 83.3% | 100.0% |
| 3927505 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 51.0 | 4.55e-01 | 96.3% | 98.8% |
| 5047755 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.61 | 49.0 | 3.82e-01 | 100.0% | 45.0% |
| 3508487 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.61 | 47.0 | 3.90e-01 | 88.9% | 100.0% |
| 3820823 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.61 | 49.0 | 3.30e-01 | 100.0% | 52.1% |
| 3760738 | 4357.1.1.9 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE, WWE_3 | 0.60 | 48.0 | 3.57e-01 | 92.6% | 60.4% |
| 4383356 | 3615.1.1.49 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Dynamin_N | 0.59 | 52.0 | 2.94e-01 | 100.0% | 8.6% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.59 | 44.0 | 4.64e-01 | 85.2% | 97.8% |
| 3285466 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 48.0 | 3.50e-01 | 94.4% | 92.1% |
| 3585434 | 109.4.1.2720 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Peptidase_M17 | 0.59 | 42.0 | 2.48e-01 | 75.9% | 33.5% |
| 4959407 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.59 | 44.0 | 4.57e-01 | 88.9% | 94.0% |
| 1096061 | 3375.1.1.1 ↗ | beta barrels › Single-stranded DNA-binding protein DdrB › Single-stranded DNA-binding protein DdrB › Single-stranded DNA-binding protein DdrB › DdrB | 0.59 | 51.0 | 3.89e-01 | 100.0% | 46.9% |
| 3783481 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.58 | 48.0 | 3.88e-01 | 100.0% | 66.7% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.58 | 42.0 | 4.44e-01 | 83.3% | 100.0% |
| 3726326 | 221.1.1.70 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › OTU1_UBXL | 0.58 | 49.0 | 4.49e-01 | 100.0% | 100.0% |
| 3627479 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.58 | 48.0 | 3.82e-01 | 100.0% | 64.0% |
| 3594014 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.57 | 47.0 | 3.14e-01 | 94.4% | 40.0% |
| 2126757 | 170.2.1.1 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p24 | 0.57 | 43.0 | 3.33e-01 | 88.9% | 92.1% |
| 3798336 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.57 | 42.0 | 3.98e-01 | 85.2% | 95.7% |
| 3266199 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.57 | 47.0 | 3.35e-01 | 94.4% | 35.4% |
| 3963468 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 43.0 | 3.61e-01 | 88.9% | 90.5% |
| 3988557 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.56 | 42.0 | 2.78e-01 | 87.0% | 27.4% |
| 3272119 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 3.70e-01 | 100.0% | 65.6% |
| 3325330 | 3346.1.1.5 ↗ | a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like | 0.55 | 39.0 | 2.82e-01 | 79.6% | 24.1% |
| 4948416 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.55 | 44.0 | 3.37e-01 | 94.4% | 44.4% |
| 3258276 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.54 | 45.0 | 3.09e-01 | 100.0% | 24.4% |
| 3926235 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 44.0 | 3.98e-01 | 100.0% | 65.0% |
| 3618240 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 40.0 | 3.44e-01 | 87.0% | 75.0% |
| 3312089 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 40.0 | 3.33e-01 | 83.3% | 51.0% |
| 4643845 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.52 | 41.0 | 3.22e-01 | 96.3% | 65.7% |
| 4967778 | 329.1.1.2 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 | 0.52 | 39.0 | 3.31e-01 | 90.7% | 72.7% |
| 4011310 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.86e-01 | 100.0% | 96.0% |
| 2797621 | 206.1.3.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP | 0.51 | 39.0 | 2.77e-01 | 87.0% | 85.9% |
| 5038375 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.50 | 43.0 | 3.01e-01 | 100.0% | 79.0% |
| 3743498 | 804.1.1.3 ↗ | a+b four layers › Hypothetical protein YwqG › Hypothetical protein YwqG › Hypothetical protein YwqG › PDCD2_C, PF30657 | 0.50 | 41.0 | 2.90e-01 | 100.0% | 77.5% |
| 2413771 | 223.1.1.1 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY | 0.50 | 39.0 | 2.80e-01 | 94.4% | 36.9% |