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MN695334.1__QGT54339.1__b3_0095__00081
Bact-VirMN695334.1__QGT54339.1__b3_0095__00081
Identity
- Accession:
- MN695334 ↗
- Kingdom:
- phage
Quality
72.2
mean pLDDT
Taxonomy
TaxID: 2674978
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fnoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 66.0 | 5.60e-01 | 100.0% | 100.0% |
| 1b33N01 | 3.30.1490.170 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) | 0.72 | 54.0 | 5.75e-01 | 98.5% | 96.4% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.69 | 48.0 | 5.05e-01 | 100.0% | 81.7% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.69 | 49.0 | 4.46e-01 | 100.0% | 55.4% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 53.0 | 5.08e-01 | 100.0% | 73.7% |
| 1bwvA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.67 | 59.0 | 4.81e-01 | 100.0% | 83.6% |
| 1yrxC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 60.0 | 5.12e-01 | 100.0% | 77.9% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.66 | 59.0 | 4.70e-01 | 100.0% | 62.1% |
| 2pokA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 4.23e-01 | 100.0% | 97.6% |
| 1y7xA02 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.65 | 45.0 | 4.81e-01 | 100.0% | 85.7% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.64 | 56.0 | 4.76e-01 | 100.0% | 84.7% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 57.0 | 4.71e-01 | 100.0% | 86.0% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.63 | 54.0 | 4.76e-01 | 100.0% | 92.2% |
| 1cmvB00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.63 | 51.0 | 3.76e-01 | 97.0% | 65.5% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 45.0 | 3.91e-01 | 100.0% | 47.7% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.62 | 54.0 | 5.06e-01 | 100.0% | 97.6% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 4.43e-01 | 98.5% | 84.3% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.61 | 53.0 | 4.77e-01 | 100.0% | 95.7% |
| 7r9xA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.61 | 46.0 | 3.18e-01 | 81.8% | 81.2% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 54.0 | 4.78e-01 | 100.0% | 78.1% |
| 2zw2A00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.60 | 53.0 | 4.92e-01 | 100.0% | 97.6% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.60 | 51.0 | 3.99e-01 | 100.0% | 62.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 53.0 | 3.93e-01 | 100.0% | 46.1% |
| 2b9wA03 | 3.30.70.1990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 4.57e-01 | 100.0% | 96.8% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 48.0 | 4.70e-01 | 100.0% | 83.1% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.58 | 49.0 | 3.17e-01 | 100.0% | 47.6% |
| 7jsnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 39.0 | 2.84e-01 | 84.8% | 22.8% |
| 3nrnA02 | 3.90.660.50 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.58 | 51.0 | 3.77e-01 | 100.0% | 47.7% |
| 1t4aA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.58 | 49.0 | 4.70e-01 | 100.0% | 100.0% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 50.0 | 4.44e-01 | 100.0% | 92.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 48.0 | 3.97e-01 | 100.0% | 51.2% |
| 1z2iA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.57 | 42.0 | 3.22e-01 | 78.8% | 84.1% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 46.0 | 4.36e-01 | 100.0% | 74.7% |
| 3laxA00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 45.0 | 3.88e-01 | 89.4% | 77.4% |
| 4opcA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 2.61e-01 | 86.4% | 26.3% |
| 2mcfA00 | 3.40.50.11630 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 3.64e-01 | 100.0% | 59.5% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 3.73e-01 | 97.0% | 99.2% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 48.0 | 4.22e-01 | 100.0% | 88.3% |
| 1ea0A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 44.0 | 2.75e-01 | 90.9% | 57.0% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.53 | 46.0 | 3.66e-01 | 100.0% | 48.1% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.00e-01 | 100.0% | 83.8% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.52e-01 | 95.5% | 52.8% |
| 2kr7A01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 45.0 | 4.07e-01 | 100.0% | 86.2% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 40.0 | 3.05e-01 | 84.8% | 89.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014247 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.70 | 61.0 | 3.85e-01 | 100.0% | 40.3% |
| 4331101 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.68 | 61.0 | 5.59e-01 | 98.5% | 94.1% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.67 | 52.0 | 4.48e-01 | 100.0% | 51.9% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 51.0 | 5.49e-01 | 100.0% | 98.2% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 52.0 | 4.50e-01 | 100.0% | 53.3% |
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.67 | 52.0 | 4.87e-01 | 100.0% | 68.7% |
| 4937773 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 52.0 | 5.47e-01 | 100.0% | 96.6% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 50.0 | 5.13e-01 | 100.0% | 87.5% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 50.0 | 4.99e-01 | 100.0% | 80.0% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.65 | 50.0 | 5.29e-01 | 100.0% | 94.9% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.65 | 50.0 | 4.82e-01 | 100.0% | 74.7% |
| 3512390 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.64 | 57.0 | 5.25e-01 | 100.0% | 97.6% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 50.0 | 5.28e-01 | 100.0% | 96.6% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 49.0 | 4.30e-01 | 100.0% | 55.4% |
| 3683470 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.63 | 55.0 | 3.77e-01 | 97.0% | 28.7% |
| 5001636 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.63 | 46.0 | 3.74e-01 | 98.5% | 41.6% |
| 3600531 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.63 | 46.0 | 5.05e-01 | 100.0% | 98.1% |
| 3504997 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.62 | 54.0 | 4.99e-01 | 100.0% | 97.6% |
| 159110 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.62 | 54.0 | 5.06e-01 | 100.0% | 97.6% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.60 | 51.0 | 3.29e-01 | 100.0% | 65.9% |
| 3593924 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.60 | 48.0 | 4.07e-01 | 100.0% | 50.8% |
| 3672819 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.60 | 51.0 | 3.93e-01 | 100.0% | 41.2% |
| 3891055 | 304.163.1.2 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › ACT_13 | 0.60 | 51.0 | 4.58e-01 | 98.5% | 84.2% |
| 3619356 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.59 | 50.0 | 3.62e-01 | 98.5% | 36.2% |
| 3495319 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 3.90e-01 | 100.0% | 54.0% |
| 4990812 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.59 | 52.0 | 4.83e-01 | 100.0% | 97.6% |
| 3331421 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 49.0 | 4.97e-01 | 100.0% | 95.4% |
| 3551719 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 47.0 | 4.58e-01 | 100.0% | 78.7% |
| 4217288 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.58 | 50.0 | 3.73e-01 | 100.0% | 64.4% |
| 2106284 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 47.0 | 4.75e-01 | 100.0% | 88.1% |
| 3992476 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.58 | 48.0 | 3.86e-01 | 97.0% | 54.5% |
| 3996298 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 51.0 | 4.81e-01 | 100.0% | 97.5% |
| 4941949 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.58 | 49.0 | 4.69e-01 | 98.5% | 96.2% |
| 5016503 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.57 | 46.0 | 3.96e-01 | 100.0% | 54.5% |
| 4014221 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 49.0 | 4.27e-01 | 100.0% | 72.4% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.57 | 46.0 | 4.46e-01 | 98.5% | 80.0% |
| 3623001 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.57 | 47.0 | 4.55e-01 | 98.5% | 97.5% |
| 3368415 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.57 | 44.0 | 3.51e-01 | 97.0% | 40.0% |
| 4928213 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 48.0 | 4.78e-01 | 98.5% | 100.0% |
| 3634674 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 47.0 | 3.01e-01 | 100.0% | 52.6% |
| 3333290 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.56 | 48.0 | 3.59e-01 | 100.0% | 67.2% |
| 4083708 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.56 | 41.0 | 3.38e-01 | 97.0% | 41.5% |
| 3420779 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.55 | 47.0 | 3.66e-01 | 100.0% | 76.2% |
| 1325196 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.55 | 48.0 | 3.89e-01 | 100.0% | 88.0% |
| 3741530 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.55 | 43.0 | 3.39e-01 | 84.8% | 45.7% |
| 4283621 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 49.0 | 4.31e-01 | 100.0% | 77.3% |
| 5077058 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.55 | 45.0 | 3.76e-01 | 97.0% | 94.4% |
| 4223323 | 304.44.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C | 0.54 | 45.0 | 4.15e-01 | 97.0% | 100.0% |
| 3915206 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.54 | 45.0 | 3.44e-01 | 100.0% | 65.7% |
| 3180683 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 39.0 | 3.38e-01 | 100.0% | 47.3% |
| 3199216 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 45.0 | 3.50e-01 | 100.0% | 80.6% |
| 3493644 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 45.0 | 3.46e-01 | 100.0% | 69.7% |
| 4985428 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.51 | 41.0 | 3.96e-01 | 100.0% | 79.5% |