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MN695334.1__QGT54456.1__b3_0213__00198
Bact-VirMN695334.1__QGT54456.1__b3_0213__00198
Identity
- Accession:
- MN695334 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 2674978
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-115
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.62 | 47.0 | 4.05e-01 | 83.3% | 95.8% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 35.0 | 3.10e-01 | 88.9% | 36.4% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.59 | 30.0 | 3.21e-01 | 100.0% | 53.1% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.58 | 43.0 | 3.66e-01 | 79.2% | 79.8% |
| 6gpkA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.58 | 30.0 | 2.60e-01 | 94.4% | 31.2% |
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.57 | 38.0 | 3.53e-01 | 70.8% | 100.0% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 38.0 | 2.45e-01 | 100.0% | 16.2% |
| 4qiwB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.56 | 47.0 | 3.76e-01 | 100.0% | 82.8% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.55 | 36.0 | 3.75e-01 | 100.0% | 76.2% |
| 6hxiA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.53 | 47.0 | 3.44e-01 | 100.0% | 44.2% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 45.0 | 3.63e-01 | 100.0% | 88.2% |
| 1aqcB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.70e-01 | 93.1% | 97.5% |
| 6whjD00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.76e-01 | 88.9% | 23.5% |
| 2aujD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 35.0 | 3.76e-01 | 84.7% | 82.3% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 44.0 | 3.82e-01 | 100.0% | 78.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997764 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.75 | 32.0 | 4.55e-01 | 84.7% | 93.3% |
| 3064081 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.72 | 32.0 | 3.54e-01 | 86.1% | 50.0% |
| 5023520 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.67 | 57.0 | 4.34e-01 | 100.0% | 95.7% |
| 5079258 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.64 | 30.0 | 3.63e-01 | 79.2% | 66.7% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.63 | 53.0 | 4.12e-01 | 100.0% | 95.0% |
| 3688776 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 43.0 | 4.21e-01 | 75.0% | 100.0% |
| 4865354 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.60 | 30.0 | 3.69e-01 | 100.0% | 78.6% |
| 3844043 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.59 | 43.0 | 4.64e-01 | 95.8% | 91.7% |
| 3546448 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.59 | 43.0 | 4.70e-01 | 98.6% | 94.9% |
| 3853992 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.57 | 41.0 | 4.24e-01 | 100.0% | 83.8% |
| 3815937 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.56 | 29.0 | 3.16e-01 | 72.2% | 55.0% |
| 3385781 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.55 | 41.0 | 3.06e-01 | 80.6% | 48.6% |
| None | — | 0.55 | 43.0 | 3.09e-01 | 84.7% | 30.0% | |
| 3314585 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.54 | 37.0 | 2.55e-01 | 100.0% | 21.0% |
| 3391909 | 1195.1.1.0 ↗ | a+b complex topology › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 | 0.54 | 39.0 | 3.05e-01 | 76.4% | 55.0% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 31.0 | 3.16e-01 | 95.8% | 57.1% |
| 3598297 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 25.0 | 3.18e-01 | 83.3% | 74.3% |
| 4031209 | 2003.1.10.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Lant_dehydr_N | 0.54 | 35.0 | 3.23e-01 | 83.3% | 50.5% |
| 2095477 | 1170.1.2.2 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.53 | 41.0 | 3.44e-01 | 88.9% | 73.4% |
| 3614014 | 7525.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like | 0.52 | 39.0 | 2.61e-01 | 81.9% | 43.1% |
| 4030297 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.52 | 34.0 | 2.57e-01 | 86.1% | 23.3% |
| 4928066 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 43.0 | 3.25e-01 | 93.1% | 71.3% |
| 4945089 | 3487.1.1.0 ↗ | a+b three layers › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 › Integron cassette protein VCH_CASS3 | 0.51 | 41.0 | 3.62e-01 | 100.0% | 60.0% |