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MN698239.1__QGZ17632.1__HTVC023P_gp03__00003
Bact-VirMN698239.1__QGZ17632.1__HTVC023P_gp03__00003
Identity
- Accession:
- MN698239 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-185
Domain cluster:
rep: MK170447__AZF89918.1__X__00084__D3-182
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22548.3 best | AEP-TOTE | 34.7 | 2.10e-08 | 71.4% | 42.2% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2faoA01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.73 | 68.0 | 5.83e-01 | 100.0% | 89.4% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.68 | 60.0 | 6.15e-01 | 98.4% | 97.2% |
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.67 | 59.0 | 5.38e-01 | 92.4% | 82.6% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.66 | 28.0 | 4.36e-01 | 77.3% | 98.7% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.66 | 29.0 | 4.26e-01 | 74.1% | 100.0% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.65 | 29.0 | 4.39e-01 | 76.8% | 100.0% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 31.0 | 4.16e-01 | 88.6% | 90.0% |
| 2gqqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.61 | 30.0 | 4.22e-01 | 75.7% | 98.8% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 28.0 | 4.10e-01 | 73.5% | 97.6% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 33.0 | 4.14e-01 | 77.3% | 87.2% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.59 | 40.0 | 4.68e-01 | 83.2% | 97.7% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 27.0 | 3.97e-01 | 96.8% | 100.0% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.57 | 31.0 | 4.03e-01 | 94.1% | 94.9% |
| 3ffrA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 28.0 | 3.51e-01 | 98.9% | 75.4% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 27.0 | 3.83e-01 | 74.6% | 100.0% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 36.0 | 3.57e-01 | 93.0% | 66.7% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 35.0 | 3.82e-01 | 94.6% | 80.5% |
| 2zuoA06 | 2.30.30.560 | Mainly Beta › Roll › SH3 type barrels. › Major vault protein, N-terminal structural repeat domain | 0.51 | 16.0 | 3.02e-01 | 95.7% | 100.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989046 | 862.1.1.8 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › AEP-TOTE | 0.84 | 81.0 | 7.44e-01 | 100.0% | 94.7% |
| 3945892 | 862.1.1.6 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Replicase | 0.74 | 56.0 | 6.11e-01 | 98.9% | 93.5% |
| 4960009 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.73 | 69.0 | 5.88e-01 | 100.0% | 87.4% |
| 4987159 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.73 | 69.0 | 6.07e-01 | 100.0% | 89.6% |
| None | — | 0.73 | 67.0 | 5.61e-01 | 98.4% | 80.0% | |
| 4650634 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.70 | 61.0 | 5.46e-01 | 92.4% | 81.6% |
| 4136209 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.70 | 33.0 | 4.87e-01 | 95.7% | 100.0% |
| 2721360 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.69 | 61.0 | 6.11e-01 | 100.0% | 93.0% |
| 3589190 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.69 | 65.0 | 6.03e-01 | 100.0% | 92.2% |
| 7175 | 862.1.1.2 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DUF1882 | 0.68 | 60.0 | 6.15e-01 | 98.4% | 97.2% |
| 3164817 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.67 | 32.0 | 4.63e-01 | 76.8% | 98.8% |
| 4311488 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.67 | 30.0 | 4.52e-01 | 74.1% | 98.8% |
| 3385766 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.65 | 32.0 | 4.51e-01 | 96.8% | 96.7% |
| 4405956 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 31.0 | 4.28e-01 | 76.2% | 91.1% |
| 4959587 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.65 | 51.0 | 5.36e-01 | 100.0% | 90.0% |
| 5011497 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.64 | 60.0 | 5.87e-01 | 100.0% | 93.5% |
| 4993423 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.64 | 28.0 | 4.22e-01 | 73.0% | 98.7% |
| 3598931 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 29.0 | 4.21e-01 | 74.6% | 100.0% |
| 3866131 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.64 | 29.0 | 4.32e-01 | 74.1% | 100.0% |
| 4025551 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.63 | 28.0 | 3.88e-01 | 76.8% | 82.1% |
| 4989477 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.63 | 29.0 | 4.27e-01 | 72.4% | 100.0% |
| 4215083 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.62 | 36.0 | 4.27e-01 | 80.0% | 80.8% |
| 3191211 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.62 | 30.0 | 4.32e-01 | 74.6% | 100.0% |
| 5035989 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 30.0 | 4.22e-01 | 79.5% | 95.6% |
| 3551988 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.61 | 28.0 | 4.11e-01 | 74.1% | 98.8% |
| 3521668 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.61 | 28.0 | 4.09e-01 | 74.1% | 98.8% |
| 3891055 | 304.163.1.2 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › ACT_13 | 0.61 | 31.0 | 4.14e-01 | 77.8% | 92.6% |
| 3232695 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 34.0 | 4.38e-01 | 93.5% | 95.2% |
| 3397656 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.60 | 28.0 | 4.02e-01 | 78.9% | 100.0% |
| 5449 | 304.121.1.1 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like › DUF1697 | 0.60 | 28.0 | 3.81e-01 | 75.7% | 86.2% |
| 4209732 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 31.0 | 4.31e-01 | 73.0% | 100.0% |
| 3402464 | 304.56.1.10 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › R1_ABCA1 | 0.58 | 33.0 | 4.01e-01 | 91.4% | 86.1% |
| 3171058 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.58 | 28.0 | 4.05e-01 | 72.4% | 100.0% |
| 3390426 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.58 | 28.0 | 3.65e-01 | 75.7% | 82.0% |
| 5058607 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 29.0 | 3.95e-01 | 74.6% | 96.7% |
| 5055915 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 29.0 | 3.98e-01 | 76.2% | 97.8% |
| 3426926 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.57 | 28.0 | 3.94e-01 | 70.8% | 100.0% |
| 4943463 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.57 | 32.0 | 4.13e-01 | 74.1% | 100.0% |
| 3505910 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.56 | 25.0 | 3.39e-01 | 89.2% | 81.1% |
| 4178993 | 304.28.1.27 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Med13_N | 0.54 | 30.0 | 3.94e-01 | 89.7% | 100.0% |
| 5080173 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.52 | 37.0 | 3.99e-01 | 94.1% | 85.8% |
| 5055913 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.50 | 29.0 | 3.71e-01 | 80.5% | 95.5% |
| 4385553 | 304.48.1.48 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 | 0.50 | 35.0 | 3.72e-01 | 77.8% | 80.0% |
D2
high
residues 202-301
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2js9A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.69 | 48.0 | 5.29e-01 | 72.0% | 98.8% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.68 | 46.0 | 5.07e-01 | 70.0% | 98.8% |
| 1pieA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.66 | 49.0 | 3.82e-01 | 78.0% | 70.6% |
| 4uskA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.65 | 46.0 | 3.70e-01 | 73.0% | 61.3% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.63 | 52.0 | 5.00e-01 | 92.0% | 89.0% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 42.0 | 4.41e-01 | 70.0% | 88.2% |
| 6lcuA02 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.62 | 47.0 | 4.67e-01 | 80.0% | 92.4% |
| 3k85A00 | 3.30.230.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.62 | 46.0 | 3.28e-01 | 79.0% | 82.7% |
| 5tgtA02 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 44.0 | 4.20e-01 | 78.0% | 77.2% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.60 | 43.0 | 3.38e-01 | 76.0% | 77.0% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 34.0 | 3.62e-01 | 79.0% | 64.4% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.59 | 46.0 | 4.66e-01 | 84.0% | 96.0% |
| 1g4wR02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 43.0 | 3.35e-01 | 79.0% | 87.3% |
| 3biqA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.57 | 44.0 | 3.32e-01 | 85.0% | 95.6% |
| 2nutB01 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.57 | 40.0 | 3.55e-01 | 74.0% | 65.4% |
| 2fozA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.56 | 49.0 | 3.42e-01 | 97.0% | 92.0% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 40.0 | 3.89e-01 | 75.0% | 82.3% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 33.0 | 3.47e-01 | 78.0% | 63.7% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.56 | 45.0 | 4.28e-01 | 87.0% | 100.0% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 4.09e-01 | 75.0% | 98.9% |
| 3bhwA00 | 1.10.3540.10 | Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain | 0.55 | 44.0 | 3.62e-01 | 86.0% | 97.3% |
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.55 | 41.0 | 4.12e-01 | 81.0% | 97.1% |
| 1nxeA02 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.55 | 40.0 | 3.01e-01 | 77.0% | 67.7% |
| 8gtzA03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 42.0 | 3.54e-01 | 87.0% | 68.5% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.53 | 39.0 | 4.12e-01 | 82.0% | 85.7% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.53 | 42.0 | 3.90e-01 | 90.0% | 91.9% |
| 3hi0A03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 41.0 | 3.35e-01 | 86.0% | 67.2% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.52 | 36.0 | 3.51e-01 | 72.0% | 73.3% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 37.0 | 3.58e-01 | 74.0% | 85.7% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 39.0 | 4.00e-01 | 100.0% | 84.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005257 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.77 | 53.0 | 4.33e-01 | 70.0% | 48.8% |
| 3586830 | 182.1.3.2 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › PriCT_1 | 0.72 | 64.0 | 6.15e-01 | 99.0% | 90.4% |
| 4437630 | 3705.1.1.0 ↗ | alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) | 0.70 | 47.0 | 5.51e-01 | 82.0% | 98.6% |
| 4252854 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.70 | 50.0 | 5.71e-01 | 82.0% | 98.7% |
| 4571183 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 44.0 | 4.34e-01 | 72.0% | 60.0% |
| 5078179 | 173.1.1.0 ↗ | alpha arrays › Uteroglobin-like › Uteroglobin-like › Uteroglobin-like | 0.69 | 50.0 | 5.63e-01 | 80.0% | 100.0% |
| 5022018 | 4973.1.1.0 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core | 0.69 | 46.0 | 5.28e-01 | 78.0% | 97.1% |
| 5064030 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.68 | 58.0 | 5.98e-01 | 98.0% | 98.9% |
| 5048198 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.67 | 48.0 | 5.40e-01 | 81.0% | 98.7% |
| 4107520 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.67 | 48.0 | 5.44e-01 | 82.0% | 100.0% |
| 4392375 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 47.0 | 4.62e-01 | 77.0% | 89.1% |
| 3758241 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.60 | 43.0 | 4.51e-01 | 75.0% | 87.8% |
| 3425325 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.59 | 42.0 | 4.46e-01 | 73.0% | 88.2% |
| 3485417 | 528.1.1.1 ↗ | alpha bundles › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP_ribosyl_GH | 0.58 | 50.0 | 3.45e-01 | 96.0% | 94.0% |
| 3577543 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 36.0 | 4.07e-01 | 82.0% | 91.4% |
| 3773789 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 41.0 | 3.60e-01 | 77.0% | 62.7% |
| 4941477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 4.05e-01 | 76.0% | 83.0% |
| 3783491 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.55 | 39.0 | 4.09e-01 | 75.0% | 85.6% |
| 4264650 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.53 | 42.0 | 3.83e-01 | 89.0% | 84.3% |
| 3776363 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.52 | 36.0 | 2.87e-01 | 72.0% | 58.1% |
| 4028772 | 574.1.1.1 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp | 0.52 | 31.0 | 3.47e-01 | 82.0% | 77.3% |
| 5046890 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 40.0 | 3.66e-01 | 90.0% | 77.9% |
| 5051451 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.50 | 38.0 | 3.97e-01 | 84.0% | 90.0% |
D3
high
residues 314-391
Domain cluster:
rep: IMGVR_UViG_3300014911_000429-3300014911-Ga0180301_100042856__D65-145
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 40.0 | 4.29e-01 | 98.7% | 71.2% |
| 3picA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 56.0 | 3.65e-01 | 100.0% | 31.5% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 30.0 | 3.25e-01 | 96.2% | 50.8% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 32.0 | 3.88e-01 | 98.7% | 84.4% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 32.0 | 3.94e-01 | 98.7% | 86.7% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 33.0 | 3.67e-01 | 100.0% | 69.4% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.79e-01 | 98.7% | 96.9% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 50.0 | 3.39e-01 | 100.0% | 40.5% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 33.0 | 3.64e-01 | 97.4% | 72.1% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 3.59e-01 | 70.5% | 63.9% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.56 | 39.0 | 3.48e-01 | 73.1% | 84.1% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 42.0 | 3.84e-01 | 80.8% | 85.7% |
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 42.0 | 3.18e-01 | 80.8% | 82.7% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 48.0 | 4.23e-01 | 98.7% | 66.7% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 29.0 | 2.68e-01 | 94.9% | 35.8% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 46.0 | 4.03e-01 | 94.9% | 69.8% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 36.0 | 3.92e-01 | 91.0% | 84.6% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.60e-01 | 98.7% | 95.3% |
| 2de6A02 | 2.20.25.680 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 33.0 | 3.68e-01 | 92.3% | 84.5% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 40.0 | 2.79e-01 | 87.2% | 90.4% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 45.0 | 4.00e-01 | 94.9% | 68.5% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 46.0 | 3.91e-01 | 100.0% | 86.3% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 41.0 | 2.99e-01 | 87.2% | 89.2% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.51 | 42.0 | 3.62e-01 | 94.9% | 92.5% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 44.0 | 3.99e-01 | 97.4% | 76.4% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 30.0 | 2.93e-01 | 94.9% | 50.0% |
| 3mwxA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 37.0 | 2.60e-01 | 84.6% | 57.8% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 42.0 | 4.25e-01 | 97.4% | 92.5% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 43.0 | 3.98e-01 | 97.4% | 75.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937908 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.68 | 39.0 | 3.10e-01 | 98.7% | 29.4% |
| 5014319 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 40.0 | 4.29e-01 | 94.9% | 67.6% |
| 2388493 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.67 | 43.0 | 4.70e-01 | 98.7% | 79.7% |
| 3587958 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 39.0 | 3.74e-01 | 96.2% | 52.2% |
| 4870688 | 7579.1.1.49 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung | 0.65 | 57.0 | 3.72e-01 | 100.0% | 31.2% |
| 5048073 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.64 | 41.0 | 4.44e-01 | 100.0% | 78.5% |
| 4887360 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 32.0 | 3.68e-01 | 94.9% | 65.0% |
| 4870694 | 7579.1.1.49 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung | 0.62 | 54.0 | 3.67e-01 | 100.0% | 37.5% |
| 5074128 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.62 | 39.0 | 4.29e-01 | 100.0% | 78.5% |
| 5023930 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 42.0 | 4.12e-01 | 73.1% | 68.2% |
| 5021724 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 35.0 | 3.49e-01 | 97.4% | 56.2% |
| 4334411 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.59 | 39.0 | 4.27e-01 | 98.7% | 81.5% |
| 3998167 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.59 | 42.0 | 3.04e-01 | 78.2% | 35.2% |
| 5000498 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.58 | 38.0 | 4.28e-01 | 100.0% | 88.3% |
| 3709800 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 41.0 | 3.84e-01 | 74.4% | 78.9% |
| 3584264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 34.0 | 2.96e-01 | 96.2% | 38.4% |
| 3743864 | 109.4.1.1787 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup188_N-subdom_III | 0.56 | 41.0 | 2.27e-01 | 78.2% | 13.7% |
| 3796352 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.55 | 36.0 | 3.82e-01 | 91.0% | 78.5% |
| 4962687 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.55 | 44.0 | 3.78e-01 | 97.4% | 54.4% |
| 5079015 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.54 | 42.0 | 2.95e-01 | 82.1% | 46.5% |
| 4001870 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.54 | 37.0 | 2.84e-01 | 100.0% | 32.0% |
| 3905550 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 35.0 | 3.16e-01 | 94.9% | 48.2% |
| 402817 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 45.0 | 4.05e-01 | 93.6% | 69.8% |
| 3738473 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 45.0 | 3.89e-01 | 93.6% | 69.2% |
| 3988063 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 39.0 | 4.22e-01 | 87.2% | 93.8% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 41.0 | 3.68e-01 | 84.6% | 78.2% |
| 3370663 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.52 | 35.0 | 3.86e-01 | 97.4% | 93.2% |
| 3890751 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 38.0 | 3.69e-01 | 100.0% | 67.8% |
| 3864474 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 45.0 | 3.51e-01 | 94.9% | 46.1% |
| 4313430 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 44.0 | 3.75e-01 | 98.7% | 100.0% |
| 3222987 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.52 | 39.0 | 2.69e-01 | 80.8% | 68.3% |
| 4324652 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 39.0 | 2.91e-01 | 84.6% | 81.8% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 43.0 | 3.86e-01 | 94.9% | 71.8% |
D4
high
residues 403-486
Domain cluster:
rep: IMGVR_UViG_3300000361_000271-3300000361-SL_6KL_011_BRINEDRAFT_10054592__D519-616
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fbqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 53.0 | 5.27e-01 | 100.0% | 96.6% |
| 2kpmA01 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 45.0 | 4.67e-01 | 98.8% | 98.7% |
| 4c3xB02 | 3.90.700.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.56 | 44.0 | 3.73e-01 | 85.7% | 99.3% |
| 4n5xA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 37.0 | 3.82e-01 | 96.4% | 71.2% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.56 | 45.0 | 4.50e-01 | 100.0% | 88.2% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 4.11e-01 | 88.1% | 98.2% |
| 3ialA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 46.0 | 3.33e-01 | 100.0% | 76.5% |
| 3ewgA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.54 | 39.0 | 4.02e-01 | 82.1% | 80.0% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 47.0 | 4.52e-01 | 98.8% | 97.9% |
| 7dklA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.34e-01 | 98.8% | 90.0% |
| 4r9iA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.52 | 37.0 | 2.68e-01 | 76.2% | 98.2% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.88e-01 | 100.0% | 70.9% |
| 1t6sB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.74e-01 | 100.0% | 79.2% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 35.0 | 3.62e-01 | 81.0% | 73.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.69e-01 | 100.0% | 67.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.63e-01 | 100.0% | 66.0% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 3.47e-01 | 100.0% | 62.1% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.96e-01 | 100.0% | 80.9% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.61e-01 | 100.0% | 65.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973884 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 45.0 | 5.15e-01 | 100.0% | 100.0% |
| 3177309 | 101.1.2.7 ↗ | alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind | 0.65 | 52.0 | 5.16e-01 | 100.0% | 83.3% |
| 3600755 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 49.0 | 4.48e-01 | 100.0% | 62.7% |
| 3251912 | 101.1.2.7 ↗ | alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind | 0.62 | 55.0 | 5.00e-01 | 100.0% | 80.9% |
| 3627861 | 101.1.2.7 ↗ | alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind | 0.62 | 55.0 | 4.86e-01 | 100.0% | 69.6% |
| 3614605 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 42.0 | 3.43e-01 | 100.0% | 38.7% |
| 3744518 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 53.0 | 4.70e-01 | 100.0% | 87.5% |
| 3784039 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.58 | 46.0 | 4.07e-01 | 85.7% | 87.8% |
| 4970751 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 41.0 | 4.26e-01 | 100.0% | 82.7% |
| 5079724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 3.92e-01 | 100.0% | 61.9% |
| 3706721 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 45.0 | 4.69e-01 | 100.0% | 96.0% |
| 3624999 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.57 | 43.0 | 4.28e-01 | 90.5% | 75.6% |
| 4928953 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.57 | 43.0 | 4.29e-01 | 100.0% | 78.8% |
| 3505855 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.56 | 42.0 | 4.29e-01 | 89.3% | 85.0% |
| 3962221 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.55 | 39.0 | 4.06e-01 | 100.0% | 82.7% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.54 | 37.0 | 3.56e-01 | 85.7% | 60.0% |
| 3400698 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 44.0 | 4.13e-01 | 92.9% | 75.2% |
| 3591478 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 40.0 | 3.79e-01 | 100.0% | 68.9% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.52 | 38.0 | 3.55e-01 | 79.8% | 62.7% |
| 3611407 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.51 | 37.0 | 3.29e-01 | 76.2% | 90.6% |
| 4649672 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.50 | 34.0 | 3.51e-01 | 84.5% | 73.8% |
| 3628199 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.50 | 37.0 | 3.51e-01 | 86.9% | 66.0% |
| 3798234 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 37.0 | 3.51e-01 | 86.9% | 66.0% |
| 2723611 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.50 | 36.0 | 3.48e-01 | 94.0% | 66.0% |