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MN698239.1__QGZ17633.1__HTVC023P_gp04__00004
Bact-VirMN698239.1__QGZ17633.1__HTVC023P_gp04__00004
Identity
- Accession:
- MN698239 ↗
- Kingdom:
- phage
Quality
92.6
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-97_199-265
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (6)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13245.13 best | AAA_19 | 59.4 | 6.10e-16 | 88.3% | 93.3% |
| PF13604.13 | AAA_30 | 30.3 | 5.00e-07 | 84.4% | 55.0% |
| PF13401.13 | AAA_22 | 32.4 | 1.50e-07 | 77.9% | 71.5% |
| PF09848.16 | SLFN-g3_helicase | 25.8 | 9.10e-06 | 77.9% | 25.5% |
| PF00580.28 | UvrD-helicase | 50.1 | 4.30e-13 | 62.3% | 32.1% |
| PF00580.28 | UvrD-helicase | 48.1 | 1.90e-12 | 38.3% | 20.3% |
D2
high
residues 104-189
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 33.0 | 3.97e-01 | 72.1% | 84.3% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.60 | 40.0 | 4.38e-01 | 72.1% | 86.8% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.59 | 39.0 | 3.90e-01 | 97.7% | 64.4% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 41.0 | 4.48e-01 | 93.0% | 94.0% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 44.0 | 4.22e-01 | 89.5% | 76.8% |
| 3rd8A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.53 | 32.0 | 3.83e-01 | 81.4% | 96.3% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 26.0 | 3.21e-01 | 93.0% | 78.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3645906 | 2004.1.1.508 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 | 0.56 | 45.0 | 2.95e-01 | 87.2% | 50.3% |
| 5049282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 45.0 | 4.60e-01 | 100.0% | 92.9% |
| 4386055 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.54 | 46.0 | 3.28e-01 | 94.2% | 94.1% |
D3
high
residues 274-352_462-546
Domain cluster:
rep: IMGVR_UViG_3300009509_000914-3300009509-Ga0123573_1001185116__D490-580_655-727
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13361.13 best | UvrD_C | 50.8 | 2.60e-13 | 81.1% | 24.8% |
| PF13538.13 | UvrD_C_2 | 32.4 | 9.40e-08 | 36.0% | 96.2% |
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 80.0 | 7.39e-01 | 98.8% | 94.5% |
| 3u4qA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 76.0 | 6.33e-01 | 100.0% | 92.4% |
| 1w36B03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 75.0 | 6.02e-01 | 99.4% | 89.0% |
| 6jimB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 60.0 | 6.61e-01 | 98.8% | 95.5% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 69.0 | 6.98e-01 | 99.4% | 94.4% |
| 6vsxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 69.0 | 7.09e-01 | 99.4% | 96.9% |
| 3vkwA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 60.0 | 6.33e-01 | 100.0% | 92.6% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 56.0 | 6.03e-01 | 93.9% | 91.5% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 59.0 | 6.23e-01 | 98.8% | 96.0% |
| 2xzlA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 66.0 | 5.95e-01 | 99.4% | 90.1% |
| 6jytA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 54.0 | 5.40e-01 | 79.9% | 92.2% |
| 4b3fX03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 65.0 | 6.01e-01 | 98.8% | 91.1% |
| 6b4kB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 57.0 | 5.64e-01 | 85.4% | 91.2% |
| 6znpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 53.0 | 4.86e-01 | 79.9% | 82.1% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 5.14e-01 | 83.5% | 80.1% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 53.0 | 4.98e-01 | 82.3% | 83.0% |
| 4b3fX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 62.0 | 4.86e-01 | 97.6% | 97.8% |
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 53.0 | 4.88e-01 | 82.3% | 81.0% |
| 2gk6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 60.0 | 5.02e-01 | 95.1% | 95.5% |
| 1yksA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 51.0 | 4.99e-01 | 80.5% | 93.3% |
| 3rc3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 52.0 | 5.56e-01 | 82.9% | 97.9% |
| 3mwyW04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 53.0 | 4.45e-01 | 84.1% | 99.6% |
| 2vl7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 51.0 | 5.10e-01 | 81.7% | 87.1% |
| 1oywA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 49.0 | 5.44e-01 | 78.7% | 100.0% |
| 2p6nA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 55.0 | 5.65e-01 | 97.6% | 93.1% |
| 4a8jF00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 52.0 | 4.41e-01 | 84.8% | 81.7% |
| 8kcaB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 51.0 | 5.05e-01 | 82.9% | 89.5% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 51.0 | 4.30e-01 | 84.1% | 86.3% |
| 1a1vA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 50.0 | 5.44e-01 | 86.0% | 97.8% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.64 | 45.0 | 4.25e-01 | 72.6% | 74.6% |
| 6fwrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 59.0 | 5.52e-01 | 99.4% | 99.5% |
| 7pliF02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 55.0 | 5.70e-01 | 97.6% | 98.7% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 55.0 | 5.62e-01 | 95.7% | 96.2% |
| 7toiA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 43.0 | 3.95e-01 | 70.1% | 73.5% |
| 3hjhA03 | 3.40.50.11140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 37.0 | 4.77e-01 | 70.7% | 100.0% |
| 1w78A01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.62 | 43.0 | 3.58e-01 | 70.1% | 60.6% |
| 3c3mA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 37.0 | 4.22e-01 | 70.7% | 78.9% |
| 3dl2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 43.0 | 4.58e-01 | 70.1% | 91.4% |
| 2ghrA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.61 | 43.0 | 3.74e-01 | 72.6% | 64.7% |
| 1hv8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 5.42e-01 | 96.3% | 98.7% |
| 6yhrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 56.0 | 5.11e-01 | 98.8% | 99.0% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 54.0 | 4.81e-01 | 97.6% | 91.7% |
| 6jp6D01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 44.0 | 4.02e-01 | 77.4% | 91.1% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 5.34e-01 | 95.7% | 100.0% |
| 3zdrA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 43.0 | 4.13e-01 | 78.0% | 99.5% |
| 4wsiB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 3.91e-01 | 74.4% | 86.1% |
| 6j19A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.88e-01 | 82.9% | 76.6% |
| 3kqxL01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.57 | 45.0 | 4.36e-01 | 83.5% | 91.5% |
| 2c4kA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 40.0 | 4.03e-01 | 71.3% | 84.4% |
| 5okaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 46.0 | 3.32e-01 | 86.0% | 98.3% |
| 3pp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 43.0 | 4.17e-01 | 79.3% | 90.2% |
| 5ktkA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.48e-01 | 92.7% | 68.1% |
| 6p2iA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 42.0 | 4.12e-01 | 79.3% | 91.6% |
| 1orvA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 39.0 | 3.38e-01 | 71.3% | 72.9% |
| 3lcmB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 39.0 | 3.73e-01 | 72.0% | 81.9% |
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 42.0 | 4.17e-01 | 79.9% | 87.7% |
| 1um9A00 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.54 | 40.0 | 3.24e-01 | 78.0% | 51.7% |
| 1j1uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 42.0 | 3.95e-01 | 82.3% | 84.7% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.52 | 47.0 | 4.42e-01 | 100.0% | 91.1% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.52 | 31.0 | 3.63e-01 | 78.0% | 83.5% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 3.69e-01 | 84.1% | 87.8% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962524 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.87 | 83.0 | 5.44e-01 | 100.0% | 52.3% |
| 3785074 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.86 | 80.0 | 4.98e-01 | 97.6% | 53.6% |
| 3284594 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.85 | 80.0 | 5.08e-01 | 98.8% | 54.2% |
| 3958289 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 80.0 | 5.73e-01 | 98.8% | 87.5% |
| 4227542 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.85 | 80.0 | 5.15e-01 | 98.8% | 53.5% |
| 3837994 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.84 | 79.0 | 5.15e-01 | 98.2% | 55.2% |
| 5005259 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.84 | 80.0 | 5.11e-01 | 99.4% | 53.3% |
| 3385476 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.84 | 79.0 | 5.11e-01 | 97.6% | 54.7% |
| 4006300 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.84 | 79.0 | 5.13e-01 | 99.4% | 53.8% |
| 3464895 | 2004.1.1.1107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, Viral_helicase1, UvrD_C | 0.84 | 79.0 | 5.06e-01 | 99.4% | 55.9% |
| 4449595 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.84 | 79.0 | 5.06e-01 | 98.8% | 54.0% |
| 4266784 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.84 | 79.0 | 5.08e-01 | 98.8% | 55.1% |
| 4950774 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.83 | 79.0 | 5.07e-01 | 98.8% | 52.2% |
| 3741693 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.83 | 79.0 | 4.99e-01 | 99.4% | 51.8% |
| 3735016 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.83 | 78.0 | 4.97e-01 | 98.8% | 53.5% |
| 5022188 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.83 | 77.0 | 5.22e-01 | 97.6% | 37.7% |
| 3186716 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.83 | 78.0 | 4.92e-01 | 99.4% | 51.5% |
| 3964423 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.82 | 78.0 | 5.05e-01 | 99.4% | 55.5% |
| 4950790 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.82 | 78.0 | 4.75e-01 | 100.0% | 46.6% |
| 5052225 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.82 | 65.0 | 4.96e-01 | 81.7% | 95.0% |
| 4030474 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.81 | 76.0 | 5.14e-01 | 98.2% | 38.3% |
| 5025063 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.79 | 74.0 | 4.84e-01 | 98.2% | 50.4% |
| 4007755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 74.0 | 4.88e-01 | 98.2% | 29.3% |
| 9698 | 2004.1.1.508 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 | 0.79 | 64.0 | 4.95e-01 | 83.5% | 99.4% |
| 3980669 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.79 | 74.0 | 5.07e-01 | 98.2% | 35.2% |
| 3945743 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.79 | 74.0 | 5.09e-01 | 98.2% | 35.6% |
| 3601477 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.79 | 73.0 | 4.65e-01 | 97.6% | 57.7% |
| 1230975 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.77 | 69.0 | 6.98e-01 | 99.4% | 94.4% |
| 3947121 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.75 | 72.0 | 4.96e-01 | 100.0% | 46.1% |
| 3283286 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.72 | 50.0 | 5.88e-01 | 76.2% | 100.0% |
| 4498286 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.71 | 66.0 | 6.07e-01 | 100.0% | 98.6% |
| 5045955 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.71 | 57.0 | 5.17e-01 | 83.5% | 97.7% |
| 5006613 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.71 | 57.0 | 4.02e-01 | 83.5% | 35.4% |
| 4336608 | 2004.1.1.185 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 | 0.71 | 66.0 | 4.42e-01 | 100.0% | 34.7% |
| 1624667 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 58.0 | 4.94e-01 | 86.0% | 90.2% |
| 3213189 | 2004.1.1.33 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind | 0.70 | 59.0 | 5.29e-01 | 87.8% | 100.0% |
| 3955473 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 64.0 | 6.03e-01 | 96.3% | 97.4% |
| 4029484 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 66.0 | 5.19e-01 | 99.4% | 77.1% |
| 312784 | 2004.1.1.508 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 | 0.70 | 66.0 | 5.09e-01 | 99.4% | 93.8% |
| 5024276 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 66.0 | 5.77e-01 | 99.4% | 87.4% |
| 4028314 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 65.0 | 5.68e-01 | 99.4% | 90.8% |
| 3825238 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.70 | 65.0 | 5.70e-01 | 99.4% | 82.6% |
| 3266728 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 65.0 | 5.96e-01 | 100.0% | 91.0% |
| 3927962 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 64.0 | 5.62e-01 | 97.6% | 96.1% |
| 3913640 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 65.0 | 5.68e-01 | 98.8% | 82.2% |
| 3567663 | 2004.1.1.185 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 | 0.69 | 65.0 | 4.39e-01 | 100.0% | 37.5% |
| 3958274 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 55.0 | 4.74e-01 | 82.9% | 64.1% |
| 3227245 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 64.0 | 5.71e-01 | 99.4% | 84.0% |
| 3199673 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 64.0 | 5.50e-01 | 99.4% | 82.0% |
| 3786529 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 65.0 | 5.75e-01 | 100.0% | 92.0% |
| 3600780 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 57.0 | 5.46e-01 | 88.4% | 85.3% |
| 3520006 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 64.0 | 5.81e-01 | 99.4% | 94.9% |
| 3924506 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 64.0 | 5.96e-01 | 99.4% | 92.5% |
| 3433486 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 64.0 | 5.73e-01 | 99.4% | 88.2% |
| 5080800 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 60.0 | 5.49e-01 | 93.3% | 98.6% |
| 3265034 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 64.0 | 5.65e-01 | 99.4% | 82.2% |
| 3591208 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 54.0 | 4.95e-01 | 82.9% | 86.7% |
| 4994530 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 63.0 | 4.44e-01 | 99.4% | 39.7% |
| 4534097 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.68 | 57.0 | 3.98e-01 | 89.0% | 51.8% |
| 3247954 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.68 | 63.0 | 5.79e-01 | 99.4% | 91.2% |
| 3267615 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.67 | 57.0 | 4.60e-01 | 88.4% | 68.5% |
| 3512323 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.67 | 56.0 | 5.06e-01 | 87.8% | 74.1% |
| 3936669 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.67 | 63.0 | 5.81e-01 | 99.4% | 89.8% |
| 5008809 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 56.0 | 3.97e-01 | 89.0% | 52.6% |
| 4927995 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.67 | 52.0 | 5.28e-01 | 81.1% | 87.3% |
| 4504218 | 2004.1.1.225 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MFD_D3 | 0.67 | 40.0 | 4.94e-01 | 76.8% | 92.4% |
| 3240292 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.67 | 63.0 | 5.73e-01 | 99.4% | 89.5% |
| None | — | 0.67 | 61.0 | 5.79e-01 | 96.3% | 96.8% | |
| 3578404 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.67 | 59.0 | 5.35e-01 | 93.3% | 87.4% |
| 4029576 | 2004.1.1.304 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD,Helicase_C,RecQ_Zn_bind | 0.66 | 60.0 | 4.14e-01 | 97.6% | 76.7% |
| 4950793 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.66 | 61.0 | 3.88e-01 | 97.6% | 47.0% |
| 3495611 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 49.0 | 4.65e-01 | 76.8% | 90.8% |
| 4029878 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.66 | 57.0 | 4.19e-01 | 92.1% | 50.0% |
| 3921087 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.66 | 52.0 | 3.71e-01 | 82.9% | 32.4% |
| 3738894 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 52.0 | 3.75e-01 | 82.9% | 91.5% |
| 3393299 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 60.0 | 5.92e-01 | 98.2% | 95.3% |
| 4022630 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 58.0 | 5.07e-01 | 97.6% | 96.2% |
| 4944436 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 56.0 | 4.13e-01 | 95.1% | 74.9% |
| 4946480 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 52.0 | 4.52e-01 | 89.0% | 93.6% |
| 4622922 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.62 | 58.0 | 5.05e-01 | 100.0% | 89.2% |
| 4224334 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.62 | 50.0 | 4.26e-01 | 84.8% | 86.2% |
| 3404782 | 2004.1.1.240 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Utp25_C | 0.62 | 55.0 | 5.15e-01 | 94.5% | 99.0% |
| 4857957 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 45.0 | 4.17e-01 | 77.4% | 82.0% |
| 3495749 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 51.0 | 4.53e-01 | 92.7% | 87.2% |
| 4958933 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.59 | 48.0 | 4.26e-01 | 86.0% | 88.2% |
| 3909737 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.58 | 41.0 | 3.91e-01 | 71.3% | 77.4% |
| 5040727 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.56 | 52.0 | 4.52e-01 | 100.0% | 87.3% |
| 3587059 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 36.0 | 4.06e-01 | 71.3% | 96.0% |
D4
high
residues 357-460
Domain cluster:
representative
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962524 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.75 | 69.0 | 4.21e-01 | 100.0% | 18.2% |
| 4964805 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 55.0 | 3.79e-01 | 100.0% | 42.0% |
| 4944001 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 53.0 | 3.26e-01 | 100.0% | 26.2% |
| 4410528 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 3.83e-01 | 95.2% | 93.5% |
| 5027661 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.51 | 34.0 | 3.33e-01 | 99.0% | 61.7% |