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MN698239.1__QGZ17661.1__HTVC023P_gp32__00032
Bact-VirMN698239.1__QGZ17661.1__HTVC023P_gp32__00032
Identity
- Accession:
- MN698239 ↗
- Kingdom:
- phage
Quality
58.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.68 | 54.0 | 4.77e-01 | 86.0% | 94.4% |
| 2mvtA00 | 1.10.60.50 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › | 0.64 | 44.0 | 4.52e-01 | 72.0% | 80.9% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 47.0 | 4.08e-01 | 98.0% | 53.0% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.60 | 41.0 | 3.06e-01 | 74.0% | 25.5% |
| 2xv9A00 | 1.10.533.30 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Nematode polyprotein allergen ABA-1 | 0.58 | 43.0 | 3.24e-01 | 90.0% | 31.3% |
| 2pusA05 | 1.10.1740.80 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.57 | 43.0 | 3.80e-01 | 86.0% | 63.7% |
| 1o9gA02 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 42.0 | 4.49e-01 | 88.0% | 100.0% |
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.54 | 40.0 | 3.44e-01 | 78.0% | 56.8% |
| 2jqtA00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.54 | 40.0 | 3.93e-01 | 88.0% | 71.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3671688 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 58.0 | 5.20e-01 | 90.0% | 57.1% |
| 3927239 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 52.0 | 5.04e-01 | 84.0% | 72.7% |
| 5043977 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.66 | 46.0 | 4.10e-01 | 76.0% | 93.3% |
| 4070378 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.65 | 46.0 | 3.40e-01 | 78.0% | 48.6% |
| 5036631 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 47.0 | 3.74e-01 | 80.0% | 92.4% |
| 2646025 | 148.1.1.19 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TIP49_C | 0.63 | 46.0 | 3.97e-01 | 80.0% | 51.9% |
| 3794765 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.61 | 46.0 | 4.11e-01 | 84.0% | 77.3% |
| 3310234 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 47.0 | 4.24e-01 | 98.0% | 60.0% |
| 3387468 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.59 | 49.0 | 4.25e-01 | 94.0% | 78.8% |
| 3176845 | 373.1.1.0 ↗ | few secondary structure elements › Zn2/Cys6 DNA-binding domain › Zn2/Cys6 DNA-binding domain › Zn2/Cys6 DNA-binding domain | 0.59 | 38.0 | 4.48e-01 | 76.0% | 94.3% |
| 3235434 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.58 | 46.0 | 3.96e-01 | 94.0% | 75.6% |
| 3794953 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.57 | 44.0 | 3.97e-01 | 88.0% | 78.1% |
| 5052347 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.56 | 38.0 | 3.76e-01 | 74.0% | 72.7% |
| 3365437 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.56 | 45.0 | 2.77e-01 | 92.0% | 24.3% |
| 4026102 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.52 | 44.0 | 3.93e-01 | 100.0% | 100.0% |
| 3520429 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.51 | 44.0 | 3.07e-01 | 100.0% | 87.4% |
| 3519933 | 103.1.1.106 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › BBS1 | 0.50 | 36.0 | 3.31e-01 | 84.0% | 93.3% |