←Back to structures

MN698239.1__QGZ17668.1__HTVC023P_gp39__00039

Bact-Vir

MN698239.1__QGZ17668.1__HTVC023P_gp39__00039

Identity

Accession:
MN698239 ↗
Kingdom:
phage

Quality

94.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC023P

TaxID: 2686455

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-100
PDB
Domain cluster: rep: IMGVR_UViG_3300026260_000155-3300026260-Ga0208408_10027703__D27-98
D2 high residues 104-180
PDB
Domain cluster: rep: IMGVR_UViG_3300025289_000217-3300025289-Ga0209002_100045151__D45-119
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4paaA05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.64 41.0 4.08e-01 100.0% 62.0%
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 40.0 3.53e-01 100.0% 44.4%
1dleB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 42.0 3.45e-01 98.7% 41.5%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 40.0 2.91e-01 83.1% 68.6%
3mcaA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 38.0 3.49e-01 100.0% 56.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1563513 1.1.8.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Ski7_3rd 0.57 41.0 3.71e-01 100.0% 55.1%
5022644 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 38.0 3.59e-01 100.0% 56.8%
3744748 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 39.0 3.70e-01 100.0% 60.0%
5083379 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 39.0 3.78e-01 100.0% 65.2%