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MN698240.1__QGZ17745.1__HTVC026P_gp30__00030

Bact-Vir

MN698240.1__QGZ17745.1__HTVC026P_gp30__00030

Identity

Accession:
MN698240 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC026P

TaxID: 2686456

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-223
PDB
Domain cluster: rep: IMGVR_UViG_3300033141_000944-3300033141-Ga0366833_100713519__D3-181
D2 high residues 229-321
PDB
Domain cluster: rep: IMGVR_UViG_3300033141_000944-3300033141-Ga0366833_100713519__D200-280
D3 medium residues 340-471
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jixB00 3.30.2010.10 Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" 0.75 32.0 3.65e-01 83.3% 51.9%
1h19A02 3.30.2010.30 Alpha Beta › 2-Layer Sandwich › Zincin-like › 0.68 40.0 4.60e-01 80.3% 79.4%
5zi7A02 3.30.2010.30 Alpha Beta › 2-Layer Sandwich › Zincin-like › 0.64 41.0 4.93e-01 80.3% 100.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5069411 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 41.0 3.40e-01 78.0% 33.6%
3956317 2498.1.1.9 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 0.62 42.0 3.30e-01 81.8% 34.0%
3721993 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.59 42.0 3.30e-01 81.1% 35.8%
3189118 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.57 40.0 3.15e-01 78.8% 35.5%
4041226 2484.1.1.263 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA, EutA, FtsA 0.51 35.0 2.57e-01 70.5% 96.5%
D4 medium residues 472-608
PDB
Domain cluster: rep: MT375519.1__QLF87964.1__Aegir_gp15__00015__D527-633