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MN698241.1__QGZ17803.1__HTVC027P_gp22__00022

Bact-Vir

MN698241.1__QGZ17803.1__HTVC027P_gp22__00022

Identity

Accession:
MN698241 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC027P

TaxID: 2686457

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-91
PDB
Domain cluster: rep: MN698242.1__QGZ17900.1__HTVC103P_gp32__00032__D25-114
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.70 41.0 3.81e-01 86.5% 47.8%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 43.0 4.87e-01 90.5% 86.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 42.0 4.96e-01 91.9% 95.7%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 40.0 4.68e-01 87.8% 89.4%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 43.0 4.85e-01 91.9% 87.0%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 43.0 4.53e-01 91.9% 70.6%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 44.0 4.55e-01 95.9% 70.4%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 37.0 4.32e-01 82.4% 83.3%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 43.0 4.69e-01 91.9% 85.0%
1bw5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 41.0 4.28e-01 91.9% 71.2%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 42.0 4.69e-01 94.6% 94.4%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 41.0 4.19e-01 97.3% 70.0%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 39.0 3.95e-01 91.9% 64.5%
1uhsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 42.0 4.69e-01 95.9% 100.0%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.60 45.0 4.82e-01 95.9% 95.2%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 41.0 2.87e-01 70.3% 63.5%
3cqxC00 1.20.58.890 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 43.0 4.17e-01 75.7% 80.2%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 39.0 3.86e-01 91.9% 62.2%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.58 38.0 3.98e-01 90.5% 74.6%
5c98A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.58 45.0 3.28e-01 86.5% 34.1%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 41.0 4.29e-01 91.9% 83.3%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 49.0 4.76e-01 100.0% 98.8%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 39.0 4.08e-01 89.2% 78.3%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.56 39.0 3.15e-01 74.3% 62.6%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 38.0 4.00e-01 87.8% 77.6%
7t2rC01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.56 36.0 3.96e-01 89.2% 86.0%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 42.0 4.60e-01 100.0% 100.0%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 36.0 3.86e-01 83.8% 77.3%
6a7hA01 1.20.140.180 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.55 45.0 3.81e-01 100.0% 53.0%
2oayA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.55 43.0 3.26e-01 87.8% 39.4%
3q23A04 6.10.140.1370 Special › Helix non-globular › Helix Hairpins › 0.54 37.0 3.47e-01 93.2% 57.1%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.53 37.0 3.91e-01 89.2% 84.1%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 39.0 3.77e-01 77.0% 96.3%
4q5nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 43.0 3.84e-01 94.6% 75.0%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 35.0 3.35e-01 85.1% 58.4%
1lm3B00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.52 43.0 3.92e-01 98.6% 81.1%
4tpoA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 43.0 2.77e-01 94.6% 27.6%
2e8gA01 1.20.1440.150 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 43.0 3.67e-01 93.2% 76.6%
2wicA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 41.0 3.90e-01 90.5% 85.6%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 42.0 4.10e-01 87.8% 84.1%
7z7vE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.50 35.0 3.77e-01 86.5% 90.0%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3391800 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 44.0 4.57e-01 91.9% 67.1%
3219860 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 42.0 4.61e-01 91.9% 75.0%
3994687 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 44.0 4.88e-01 91.9% 85.5%
3997838 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 43.0 4.59e-01 91.9% 72.3%
3483962 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 44.0 4.14e-01 93.2% 53.3%
3268716 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 44.0 4.52e-01 91.9% 68.6%
4275568 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 44.0 4.50e-01 93.2% 68.6%
3471114 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 43.0 3.71e-01 93.2% 40.0%
2466 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.66 42.0 4.18e-01 91.9% 61.8%
3911740 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.66 44.0 4.89e-01 95.9% 92.7%
3484360 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 39.0 4.01e-01 89.2% 62.9%
3609126 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.62 54.0 4.65e-01 98.6% 68.3%
3886097 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 36.0 3.59e-01 90.5% 57.3%
3972373 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 41.0 3.15e-01 95.9% 30.3%
3289474 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 51.0 4.79e-01 100.0% 86.3%
3773905 604.3.1.33 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 0.58 49.0 4.90e-01 100.0% 94.7%
4404513 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.58 43.0 4.36e-01 100.0% 80.0%
4657087 141.1.1.8 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 0.58 49.0 3.22e-01 95.9% 31.5%
3491715 632.6.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.56 36.0 3.57e-01 71.6% 61.3%
3999246 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.56 47.0 4.28e-01 98.6% 84.8%
3446288 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.56 47.0 3.90e-01 97.3% 72.9%
3406011 109.10.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Translin › Translin 0.56 47.0 3.75e-01 100.0% 45.0%
3361064 101.1.1.20 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A 0.55 46.0 4.33e-01 90.5% 90.9%
4002563 192.8.1.303 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Tmemb_cc2 0.55 39.0 2.99e-01 75.7% 40.6%
4957831 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 37.0 2.95e-01 75.7% 32.1%
4809777 6004.1.1.2 ↗ extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 0.54 38.0 3.37e-01 73.0% 50.5%
3794988 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.54 46.0 4.00e-01 100.0% 76.0%
3574764 108.1.1.1 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.54 43.0 3.49e-01 87.8% 65.3%
3692058 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 44.0 3.58e-01 93.2% 70.0%
4371771 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.53 45.0 3.78e-01 100.0% 88.6%
3715580 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 38.0 3.71e-01 97.3% 68.2%
3415750 603.1.1.101 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_6 0.53 44.0 2.88e-01 100.0% 62.1%
3731997 3831.1.1.0 ↗ alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 0.52 36.0 3.14e-01 74.3% 79.2%
5022467 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.52 37.0 3.39e-01 75.7% 77.0%
3520855 109.4.1.14 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 0.52 45.0 3.66e-01 98.6% 98.6%
3192984 4156.1.1.4 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.51 42.0 3.42e-01 98.6% 86.3%
4943145 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.50 42.0 3.97e-01 97.3% 81.1%