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MN698241.1__QGZ17812.1__HTVC027P_gp31__00031

Bact-Vir

MN698241.1__QGZ17812.1__HTVC027P_gp31__00031

Identity

Accession:
MN698241 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC027P

TaxID: 2686457

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-62
PDB
Domain cluster: rep: IMGVR_UViG_3300011013_002706-3300011013-Ga0114934_100044523__D4-60
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.62 56.0 3.63e-01 100.0% 32.9%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.61 44.0 3.22e-01 100.0% 28.3%
3q6bA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.55 38.0 3.62e-01 100.0% 59.5%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.54 43.0 3.05e-01 100.0% 72.9%
6ku8A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 36.0 3.47e-01 100.0% 59.4%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.54 40.0 3.02e-01 100.0% 31.8%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 30.0 2.55e-01 100.0% 34.3%
1t6eX01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 42.0 3.10e-01 94.9% 51.1%
2wzpP01 2.40.30.210 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 42.0 3.53e-01 100.0% 52.3%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 42.0 3.46e-01 89.8% 71.4%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.50 42.0 4.08e-01 100.0% 83.8%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 45.0 4.41e-01 100.0% 63.1%
3997130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 3.66e-01 98.3% 46.0%
3494714 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.58 35.0 3.39e-01 100.0% 51.4%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 3.39e-01 98.3% 31.4%
3824511 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.55 47.0 3.74e-01 94.9% 47.5%
3502254 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.54 46.0 3.94e-01 94.9% 63.2%
1144777 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.54 46.0 3.91e-01 100.0% 70.2%
4202541 1.1.9.23 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.53 46.0 3.74e-01 100.0% 55.7%
4940409 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.53 39.0 3.56e-01 100.0% 57.5%
3633076 1.1.1.30 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.53 35.0 3.05e-01 71.2% 43.8%
4029705 256.1.1.0 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.52 38.0 3.80e-01 100.0% 78.3%
3701641 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 42.0 2.87e-01 96.6% 73.5%
3684561 304.160.1.2 ↗ a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › Helitron_like_N 0.52 35.0 2.82e-01 100.0% 31.9%
3587374 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 38.0 2.89e-01 84.7% 40.6%