←Back to structures

MN698244.1QGZ18057.1HTVC106P_gp14__00014

Bact-Vir

MN698244.1__QGZ18057.1__HTVC106P_gp14__00014

Identity

Accession:: MN698244 ↗
Kingdom:: phage

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC106P

TaxID: 2686460

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 149-184

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yxrA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.82	68.0	5.51e-01	100.0%	51.4%
1owlA02	1.25.40.80	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.82	66.0	4.64e-01	100.0%	28.5%
2p0tA01	1.10.60.30	Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains	0.75	55.0	4.34e-01	91.7%	38.2%
4hfkB00	1.20.120.1620	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.74	60.0	4.30e-01	88.9%	32.7%
4z5qA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.73	59.0	3.45e-01	100.0%	11.3%
3qxyA02	3.90.1420.10	Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain	0.73	66.0	4.15e-01	100.0%	28.1%
1vf6C00	1.10.287.650	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain	0.71	54.0	4.86e-01	86.1%	58.8%
3ua3B01	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.69	54.0	3.19e-01	91.7%	11.5%
1zl8B00	1.10.287.650	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain	0.62	49.0	4.50e-01	100.0%	96.3%
3tw8A03	6.10.140.1000	Special › Helix non-globular › Helix Hairpins ›	0.61	46.0	4.47e-01	83.3%	92.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3421107	192.6.1.0 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain	0.91	75.0	6.96e-01	91.7%	73.3%
5000553	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.90	77.0	6.08e-01	97.2%	48.6%
4465242	192.6.1.0 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain	0.86	71.0	6.61e-01	94.4%	73.3%
3495650	3223.1.1.1 ↗	beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC	0.86	74.0	4.10e-01	100.0%	7.7%
3197460	6132.1.1.7 ↗	alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › efThoc1	0.86	75.0	6.52e-01	100.0%	65.5%
4248599	192.6.1.1 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE	0.83	69.0	6.34e-01	97.2%	70.8%
3711093	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.81	70.0	4.04e-01	100.0%	12.4%
3439874	109.4.1.1258 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2	0.80	63.0	3.54e-01	91.7%	7.9%
3990693	192.17.1.0 ↗	alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like	0.79	55.0	5.33e-01	77.8%	65.0%
3748949	544.1.1.0 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18	0.74	60.0	4.32e-01	97.2%	31.2%