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MN698244.1__QGZ18084.1__HTVC106P_gp41__00041
Bact-VirMN698244.1__QGZ18084.1__HTVC106P_gp41__00041
Identity
- Accession:
- MN698244 ↗
- Kingdom:
- phage
Quality
68.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-94
Domain cluster:
representative
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3886005 | 601.2.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes | 0.56 | 36.0 | 3.42e-01 | 89.1% | 52.2% |
| 3573038 | 4207.1.1.99 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF28139 | 0.54 | 36.0 | 3.63e-01 | 82.6% | 68.9% |
| 3689895 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 34.0 | 3.36e-01 | 82.6% | 59.0% |
| 3649051 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.53 | 43.0 | 2.85e-01 | 98.9% | 20.2% |
| 5046472 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.52 | 32.0 | 3.22e-01 | 75.0% | 60.0% |
D2
high
residues 104-158
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vkwA02 | 3.40.109.30 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 | 0.75 | 63.0 | 5.24e-01 | 92.7% | 76.0% |
| 6wimA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.74 | 57.0 | 5.16e-01 | 83.6% | 78.4% |
| 1mkiA02 | 1.10.1500.10 | Mainly Alpha › Orthogonal Bundle › Probable Glutaminase Ybgj; Chain: A, domain 2 › | 0.73 | 56.0 | 4.19e-01 | 83.6% | 92.8% |
| 1pwkA00 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.71 | 59.0 | 4.99e-01 | 92.7% | 78.0% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.70 | 51.0 | 4.52e-01 | 78.2% | 54.3% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.68 | 48.0 | 3.65e-01 | 76.4% | 54.9% |
| 4y2fA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 59.0 | 4.40e-01 | 100.0% | 88.1% |
| 1o0uA01 | 3.40.1480.10 | Alpha Beta › 3-Layer(aba) Sandwich › glycerate kinase, domain 1 › MOFRL domain | 0.67 | 53.0 | 3.77e-01 | 89.1% | 95.7% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.66 | 55.0 | 3.90e-01 | 100.0% | 51.3% |
| 4gw9A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 57.0 | 3.82e-01 | 100.0% | 79.5% |
| 2z9eA02 | 3.30.70.2590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 55.0 | 4.43e-01 | 98.2% | 92.0% |
| 1f5mA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.64 | 55.0 | 3.95e-01 | 100.0% | 80.7% |
| 6l2cB00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.63 | 54.0 | 3.27e-01 | 98.2% | 87.7% |
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.62 | 46.0 | 3.57e-01 | 81.8% | 64.1% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.62 | 48.0 | 4.05e-01 | 85.5% | 91.8% |
| 2o5hA00 | 1.10.3510.10 | Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like | 0.61 | 52.0 | 4.06e-01 | 98.2% | 70.3% |
| 1jrmA00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.60 | 47.0 | 3.98e-01 | 90.9% | 58.7% |
| 1vzyA01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.60 | 50.0 | 3.41e-01 | 100.0% | 78.6% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 3.24e-01 | 100.0% | 21.8% |
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.58 | 50.0 | 3.13e-01 | 100.0% | 51.4% |
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 42.0 | 3.73e-01 | 100.0% | 53.0% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 40.0 | 3.99e-01 | 100.0% | 71.9% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 46.0 | 3.90e-01 | 100.0% | 72.2% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.57 | 50.0 | 4.22e-01 | 100.0% | 76.6% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 35.0 | 3.87e-01 | 76.4% | 81.0% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 42.0 | 3.84e-01 | 100.0% | 59.5% |
| 3danA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 42.0 | 2.48e-01 | 81.8% | 23.5% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 41.0 | 2.91e-01 | 78.2% | 85.6% |
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.56 | 43.0 | 3.17e-01 | 89.1% | 64.9% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 41.0 | 2.86e-01 | 78.2% | 62.0% |
| 4ktwA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 48.0 | 3.48e-01 | 100.0% | 46.3% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.55 | 38.0 | 4.01e-01 | 87.3% | 89.1% |
| 2pokA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 47.0 | 3.07e-01 | 100.0% | 46.9% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 34.0 | 2.61e-01 | 100.0% | 23.9% |
| 3pjvD01 | 3.30.110.200 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.55 | 44.0 | 4.00e-01 | 90.9% | 66.7% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.54 | 41.0 | 3.71e-01 | 89.1% | 94.2% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.43e-01 | 78.2% | 63.5% |
| 4dwsA01 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 40.0 | 3.19e-01 | 100.0% | 36.6% |
| 3l8aA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 44.0 | 3.26e-01 | 94.5% | 69.9% |
| 4k2hD00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 40.0 | 2.79e-01 | 80.0% | 96.8% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.19e-01 | 100.0% | 45.1% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 45.0 | 3.00e-01 | 100.0% | 59.3% |
| 4yleA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.41e-01 | 100.0% | 71.2% |
| 8a9nA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 39.0 | 2.98e-01 | 81.8% | 52.7% |
| 3zokA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.52 | 43.0 | 3.00e-01 | 94.5% | 51.8% |
| 4bqqB02 | 3.90.1750.20 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 | 0.51 | 44.0 | 3.10e-01 | 100.0% | 45.3% |
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 41.0 | 3.11e-01 | 89.1% | 48.6% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 2.73e-01 | 100.0% | 34.0% |
| 3fvcA02 | 1.20.5.1890 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 37.0 | 3.12e-01 | 81.8% | 90.0% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3497652 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.78 | 60.0 | 5.18e-01 | 83.6% | 76.5% |
| 3595156 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.78 | 63.0 | 5.27e-01 | 87.3% | 75.6% |
| 3897425 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.77 | 63.0 | 5.36e-01 | 87.3% | 76.5% |
| 3488996 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.77 | 62.0 | 5.33e-01 | 87.3% | 76.5% |
| 3471972 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.77 | 60.0 | 5.15e-01 | 83.6% | 76.5% |
| 3592682 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.77 | 62.0 | 5.31e-01 | 87.3% | 76.5% |
| 3471144 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.77 | 62.0 | 5.31e-01 | 87.3% | 76.5% |
| 148947 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.76 | 61.0 | 5.23e-01 | 87.3% | 76.7% |
| 3478205 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.75 | 58.0 | 5.13e-01 | 83.6% | 85.0% |
| 3226757 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.75 | 64.0 | 5.44e-01 | 92.7% | 78.8% |
| 3596959 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.74 | 63.0 | 5.37e-01 | 92.7% | 81.2% |
| 4890953 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.74 | 62.0 | 5.24e-01 | 92.7% | 75.8% |
| 3929562 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.74 | 62.0 | 5.38e-01 | 92.7% | 82.1% |
| 3794765 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.74 | 62.0 | 5.59e-01 | 92.7% | 88.0% |
| 2779089 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.74 | 62.0 | 5.21e-01 | 92.7% | 75.8% |
| 3482059 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.73 | 62.0 | 5.18e-01 | 92.7% | 74.2% |
| 3487926 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.73 | 62.0 | 5.33e-01 | 92.7% | 81.2% |
| 3470157 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.73 | 62.0 | 5.35e-01 | 92.7% | 78.6% |
| 3235073 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.73 | 56.0 | 5.34e-01 | 83.6% | 96.9% |
| 3217704 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.73 | 62.0 | 5.12e-01 | 92.7% | 74.7% |
| 2779098 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.73 | 61.0 | 5.25e-01 | 92.7% | 75.9% |
| 3497368 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.73 | 61.0 | 5.28e-01 | 92.7% | 81.2% |
| 3597342 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.73 | 61.0 | 5.26e-01 | 92.7% | 81.2% |
| 3592617 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.72 | 61.0 | 5.26e-01 | 92.7% | 80.0% |
| 3217790 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.72 | 56.0 | 5.17e-01 | 83.6% | 91.4% |
| 3235434 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.72 | 61.0 | 5.12e-01 | 92.7% | 86.7% |
| 3924030 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.72 | 60.0 | 5.30e-01 | 92.7% | 82.5% |
| 3218182 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.71 | 60.0 | 5.62e-01 | 92.7% | 92.6% |
| 3484480 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.71 | 60.0 | 5.32e-01 | 92.7% | 89.7% |
| 4680651 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.71 | 63.0 | 4.68e-01 | 100.0% | 87.1% |
| 3856351 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.71 | 60.0 | 4.80e-01 | 92.7% | 68.6% |
| 3224270 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.71 | 57.0 | 4.55e-01 | 87.3% | 63.8% |
| 3990992 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.71 | 61.0 | 5.47e-01 | 94.5% | 85.3% |
| 3470090 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.71 | 55.0 | 5.10e-01 | 85.5% | 68.6% |
| 4978793 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.71 | 57.0 | 4.01e-01 | 87.3% | 52.7% |
| 3618395 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.70 | 59.0 | 5.34e-01 | 92.7% | 87.8% |
| 3938300 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.70 | 60.0 | 5.17e-01 | 94.5% | 81.2% |
| 3517087 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.70 | 59.0 | 4.75e-01 | 92.7% | 65.7% |
| 3247447 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.70 | 59.0 | 5.18e-01 | 92.7% | 80.0% |
| 2779096 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.70 | 58.0 | 4.97e-01 | 92.7% | 76.7% |
| 3793596 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.70 | 58.0 | 5.27e-01 | 92.7% | 84.0% |
| 3997010 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.69 | 58.0 | 5.11e-01 | 92.7% | 95.0% |
| 4297454 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.69 | 49.0 | 3.68e-01 | 76.4% | 52.9% |
| 3616932 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.69 | 58.0 | 5.00e-01 | 92.7% | 85.7% |
| 4166731 | 4019.1.1.5 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Glutaminase | 0.69 | 54.0 | 4.06e-01 | 87.3% | 90.7% |
| 4988946 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.68 | 60.0 | 4.21e-01 | 100.0% | 81.7% |
| 3623103 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.68 | 57.0 | 5.34e-01 | 92.7% | 94.0% |
| 4000640 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.68 | 56.0 | 5.15e-01 | 92.7% | 86.3% |
| 3628694 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.67 | 56.0 | 5.35e-01 | 92.7% | 96.9% |
| 3939211 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.67 | 56.0 | 4.88e-01 | 92.7% | 77.1% |
| 3926766 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.67 | 55.0 | 4.99e-01 | 92.7% | 85.3% |
| 3947356 | 223.1.1.9 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF484 | 0.66 | 57.0 | 4.00e-01 | 100.0% | 71.9% |
| 4985869 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.66 | 55.0 | 4.81e-01 | 100.0% | 80.9% |
| 5008605 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.66 | 57.0 | 4.12e-01 | 100.0% | 78.8% |
| 5045065 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.65 | 56.0 | 3.88e-01 | 100.0% | 74.4% |
| 4129336 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.64 | 54.0 | 4.04e-01 | 100.0% | 40.0% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.63 | 53.0 | 4.46e-01 | 94.5% | 55.8% |
| 3794953 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.62 | 52.0 | 4.83e-01 | 100.0% | 72.6% |
| 3875941 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.62 | 45.0 | 3.19e-01 | 98.2% | 26.1% |
| 3414906 | 375.1.1.148 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RPA_interact_C | 0.62 | 44.0 | 4.72e-01 | 81.8% | 97.8% |
| 3839119 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.61 | 44.0 | 4.10e-01 | 81.8% | 65.3% |
| 4344900 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.60 | 51.0 | 3.97e-01 | 100.0% | 68.5% |
| 4004011 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 54.0 | 4.26e-01 | 100.0% | 90.9% |
| 4027092 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 45.0 | 3.67e-01 | 81.8% | 61.8% |
| 3954395 | 3097.1.1.0 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y | 0.59 | 43.0 | 4.35e-01 | 90.9% | 81.8% |
| 4487383 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 42.0 | 3.47e-01 | 80.0% | 46.4% |
| 4966192 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.57 | 45.0 | 3.59e-01 | 87.3% | 100.0% |
| 3439039 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.57 | 50.0 | 3.77e-01 | 100.0% | 41.5% |
| 3580778 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.57 | 46.0 | 3.32e-01 | 90.9% | 49.7% |
| 3959880 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 4.02e-01 | 92.7% | 63.3% |
| 3244218 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.56 | 46.0 | 3.38e-01 | 92.7% | 55.5% |
| 3926232 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.56 | 46.0 | 3.41e-01 | 92.7% | 56.7% |
| 4013638 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 3.96e-01 | 96.4% | 86.3% |
| 3626049 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.55 | 46.0 | 3.02e-01 | 100.0% | 52.2% |
| 3975404 | 4137.1.1.1 ↗ | a+b three layers › YehU-like › YehU-like › YehU-like › UPF0270 | 0.55 | 38.0 | 3.52e-01 | 92.7% | 57.1% |
| 3319155 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.54 | 39.0 | 2.43e-01 | 76.4% | 30.4% |
| 3709555 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.53 | 36.0 | 3.64e-01 | 100.0% | 69.1% |
| 5078768 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.52 | 40.0 | 3.04e-01 | 90.9% | 92.5% |
| 1291586 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.52 | 40.0 | 2.94e-01 | 81.8% | 75.5% |
| 3799834 | 3409.1.1.2 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › VPS38 | 0.52 | 42.0 | 3.18e-01 | 92.7% | 55.9% |
| 4417105 | 2004.1.1.77 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87,HerA_C | 0.52 | 43.0 | 2.67e-01 | 100.0% | 86.6% |
| 4109302 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.50 | 37.0 | 3.09e-01 | 81.8% | 63.8% |
D3
high
residues 439-585
D4
medium
residues 168-273
D5
medium
residues 274-359
D6
medium
residues 388-411_686-744
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.51 | 36.0 | 2.98e-01 | 75.9% | 87.6% |
| 3bptA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 39.0 | 2.58e-01 | 83.1% | 84.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244102 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.56 | 43.0 | 3.99e-01 | 84.3% | 78.2% |
| 5029796 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 36.0 | 3.19e-01 | 71.1% | 56.7% |
| 3598562 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.52 | 40.0 | 3.91e-01 | 81.9% | 82.8% |
| 3167091 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.52 | 40.0 | 3.90e-01 | 80.7% | 82.2% |
D7
medium
residues 412-438_586-622
Domain cluster:
representative
D8
medium
residues 623-685
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.61 | 47.0 | 4.31e-01 | 87.3% | 84.1% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 48.0 | 4.03e-01 | 100.0% | 57.6% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 43.0 | 3.54e-01 | 95.2% | 67.2% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 42.0 | 4.09e-01 | 96.8% | 86.3% |
D9
medium
residues 745-830
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1biqA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.60 | 48.0 | 3.29e-01 | 90.7% | 75.3% |
| 2fbaA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 50.0 | 3.12e-01 | 93.0% | 18.3% |
| 3nqwA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 44.0 | 3.53e-01 | 82.6% | 77.5% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 39.0 | 3.36e-01 | 70.9% | 84.2% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 44.0 | 3.27e-01 | 82.6% | 56.4% |
| 1vj7B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 44.0 | 3.55e-01 | 87.2% | 64.7% |
| 2xsbA02 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.55 | 46.0 | 3.90e-01 | 94.2% | 81.9% |
| 5x9vA01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.55 | 45.0 | 3.32e-01 | 91.9% | 32.2% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.54 | 39.0 | 3.86e-01 | 76.7% | 93.4% |
| 2w00A05 | 1.20.58.2040 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 41.0 | 3.89e-01 | 83.7% | 75.2% |
| 4kmgA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 38.0 | 3.81e-01 | 76.7% | 84.1% |
| 2doaA00 | 1.10.10.2670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase | 0.52 | 40.0 | 3.83e-01 | 86.0% | 92.3% |
| 3oo3A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.89e-01 | 95.3% | 74.9% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 41.0 | 3.45e-01 | 89.5% | 53.5% |
| 6iubA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.79e-01 | 82.6% | 64.0% |
| 2efjA01 | 1.10.1200.270 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Methyltransferase, alpha-helical capping domain | 0.51 | 39.0 | 3.41e-01 | 82.6% | 85.8% |
| 2w3cA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.50 | 39.0 | 2.78e-01 | 87.2% | 25.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040820 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.69 | 42.0 | 4.14e-01 | 87.2% | 57.8% |
| 3623527 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 38.0 | 4.18e-01 | 88.4% | 71.4% |
| 3688231 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.64 | 55.0 | 4.41e-01 | 93.0% | 69.1% |
| 3709289 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.64 | 44.0 | 3.64e-01 | 72.1% | 90.3% |
| 3429182 | 3826.1.1.48 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF4220 | 0.63 | 56.0 | 5.47e-01 | 100.0% | 100.0% |
| 4930554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 31.0 | 3.57e-01 | 75.6% | 66.7% |
| 4403195 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 39.0 | 3.82e-01 | 79.1% | 62.1% |
| 3410018 | 603.1.1.104 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 | 0.58 | 52.0 | 3.42e-01 | 100.0% | 68.8% |
| 3584809 | 131.1.1.12 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 | 0.58 | 44.0 | 3.43e-01 | 82.6% | 71.5% |
| 4999991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 44.0 | 3.99e-01 | 81.4% | 88.7% |
| 4392854 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.57 | 43.0 | 3.07e-01 | 79.1% | 42.4% |
| 4020727 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.57 | 39.0 | 3.48e-01 | 70.9% | 52.8% |
| 3497542 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.55 | 42.0 | 2.79e-01 | 82.6% | 52.6% |
| 3739990 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.55 | 43.0 | 2.81e-01 | 88.4% | 31.4% |
| 4098488 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.55 | 43.0 | 4.47e-01 | 87.2% | 100.0% |
| 3582740 | 5001.1.1.7 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Frizzled | 0.54 | 46.0 | 3.55e-01 | 100.0% | 70.0% |
| 5019209 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.54 | 45.0 | 3.33e-01 | 93.0% | 37.0% |
| 4546356 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 3.74e-01 | 70.9% | 98.8% |
| 3796044 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.54 | 46.0 | 3.86e-01 | 100.0% | 75.6% |
| 4478999 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.52 | 36.0 | 2.89e-01 | 72.1% | 68.8% |
| 3675097 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 41.0 | 2.94e-01 | 96.5% | 82.8% |