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MN698246.1__QGZ18183.1__HTVC112P_gp06__00006

Bact-Vir

MN698246.1__QGZ18183.1__HTVC112P_gp06__00006

Identity

Accession:
MN698246 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_HTVC112P

TaxID: 2686462

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-75
PDB
Domain cluster: rep: MT375525.1__QLF88266.1__Greip_gp28__00028__D4-59
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 51.0 4.81e-01 77.3% 77.2%
3safA02 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.70 50.0 4.51e-01 85.3% 56.0%
1ailA00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.68 39.0 4.09e-01 88.0% 61.4%
5c0yA02 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.66 46.0 4.31e-01 85.3% 58.1%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.62 45.0 4.43e-01 77.3% 80.7%
2xheA03 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.61 52.0 4.40e-01 93.3% 62.8%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 42.0 3.92e-01 78.7% 99.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4653139 4044.1.1.1 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane 0.65 47.0 4.08e-01 74.7% 55.5%
3516870 5094.1.1.0 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like 0.59 46.0 4.11e-01 84.0% 79.0%