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MN698247.1__QGZ18240.1__HTVC115P_gp05__00005
Bact-VirMN698247.1__QGZ18240.1__HTVC115P_gp05__00005
Identity
- Accession:
- MN698247 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-74
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.63 | 47.0 | 4.51e-01 | 82.4% | 76.4% |
| 1twfI01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 31.0 | 3.79e-01 | 75.7% | 78.3% |
| 1lshB00 | 2.20.90.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain | 0.60 | 47.0 | 3.71e-01 | 94.6% | 37.9% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 3.70e-01 | 82.4% | 81.2% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.57 | 47.0 | 3.11e-01 | 93.2% | 38.6% |
| 5hsqA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 41.0 | 3.50e-01 | 78.4% | 96.1% |
| 1gt7A00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.56 | 44.0 | 3.04e-01 | 86.5% | 26.6% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 3.69e-01 | 82.4% | 88.4% |
| 6g1yA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 38.0 | 3.31e-01 | 71.6% | 79.2% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 3.27e-01 | 100.0% | 48.1% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.54 | 33.0 | 3.57e-01 | 89.2% | 72.6% |
| 4lxqB00 | 3.40.50.12230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 2.96e-01 | 87.8% | 25.9% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 2.89e-01 | 98.6% | 69.9% |
| 1tpmA00 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.53 | 34.0 | 3.81e-01 | 87.8% | 94.0% |
| 3f3fD01 | 2.20.25.500 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 29.0 | 3.39e-01 | 74.3% | 76.5% |
| 2eeiA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 38.0 | 3.42e-01 | 77.0% | 88.7% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 36.0 | 3.44e-01 | 71.6% | 93.3% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.52 | 35.0 | 3.36e-01 | 91.9% | 59.1% |
| 3nhqA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 3.15e-01 | 74.3% | 98.3% |
| 4mp8A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.52 | 40.0 | 3.18e-01 | 85.1% | 77.6% |
| 1c0aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 43.0 | 2.78e-01 | 90.5% | 75.2% |
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 3.73e-01 | 75.7% | 81.8% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.51 | 43.0 | 2.78e-01 | 94.6% | 59.8% |
| 1kw3B02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 37.0 | 2.96e-01 | 78.4% | 46.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3742968 | 223.5.1.0 ↗ | a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like | 0.67 | 48.0 | 4.87e-01 | 75.7% | 100.0% |
| 3176053 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 3.66e-01 | 71.6% | 75.4% |
| 8012 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.61 | 31.0 | 3.71e-01 | 75.7% | 71.4% |
| 3724900 | 323.1.1.25 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › SIDD_N | 0.61 | 43.0 | 3.24e-01 | 74.3% | 82.7% |
| 4057045 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.61 | 41.0 | 3.57e-01 | 70.3% | 97.4% |
| 3714612 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 43.0 | 3.35e-01 | 75.7% | 86.1% |
| 3471405 | 223.7.1.1 ↗ | a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like › C12orf66_like | 0.60 | 42.0 | 3.52e-01 | 73.0% | 76.9% |
| None | — | 0.56 | 44.0 | 2.84e-01 | 89.2% | 59.3% | |
| 3927128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 41.0 | 3.47e-01 | 78.4% | 75.8% |
| 3686573 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.55 | 43.0 | 2.69e-01 | 89.2% | 53.0% |
| 3212404 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.55 | 36.0 | 2.47e-01 | 93.2% | 19.2% |
| 3701084 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.54 | 43.0 | 3.24e-01 | 87.8% | 73.5% |
| None | — | 0.54 | 43.0 | 2.67e-01 | 91.9% | 40.7% | |
| 3989890 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.54 | 29.0 | 3.13e-01 | 70.3% | 58.5% |
| 3681699 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.54 | 41.0 | 2.58e-01 | 82.4% | 86.4% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 40.0 | 3.45e-01 | 85.1% | 84.0% |
| 3226237 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 33.0 | 2.31e-01 | 93.2% | 19.2% |